Pre_GI: BLASTP Hits

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Query: NC_012660:4734363:4735697 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4735697, End: 4736362, Length: 666

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013665:849508:8543158543158556011287Methanocella paludicola SANAE, complete genome3-hexulose-6-phosphate synthase1e-24113
NC_014817:29795:322763227632965690Asticcacaulis excentricus CB 48 chromosome 2, complete sequence4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase2e-1892.4
NC_009512:1518113:153004315300431530759717Pseudomonas putida F1, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase2e-1479.3
NC_016604:3137694:314377031437703144462693Mycobacterium rhodesiae NBB3 chromosome, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase1e-0860.1
NC_009512:3618055:362013936201393620855717Pseudomonas putida F1, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase1e-1480.1
NC_008146:2744612:2772982277298227745111530Mycobacterium sp. MCS, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase1e-1686.7
NC_008705:2763131:2790870279087027923991530Mycobacterium sp. KMS, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase1e-1686.7
NC_016048:3899878:391144839114483912131684Oscillibacter valericigenes Sjm18-20, complete genomealdolase7e-36150
NC_003911:2540453:256384325638432564538696Silicibacter pomeroyi DSS-3, complete genomealdolase, putative7e-1477.4
NC_009712:669647:6707536707536720391287Candidatus Methanoregula boonei 6A8, complete genomebifunctional hexulose-6-phosphate synthase/ribonuclease regulator9e-24110
NC_006526:1976779:200622020062202006927708Zymomonas mobilis subsp. mobilis ZM4, complete genomedemethylmenaquinone methyltransferase1e-0963.5
NC_018581:759932:778611778611779300690Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase4e-1271.6
NC_019977:253895:2734122734122745631152Methanomethylovorans hollandica DSM 15978, complete genomeDemethylmenaquinone methyltransferase5e-2097.8
NC_018581:3646489:365002036500203650793774Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase1e-1170.1
NC_015145:3657103:367218536721853672874690Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeDemethylmenaquinone methyltransferase3e-1065.5
NC_018581:759932:779297779297779950654Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase1e-0757
NC_018581:759932:779952779952780611660Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase-like protein4e-0961.6
NC_009511:2726296:274098727409872741685699Sphingomonas wittichii RW1 chromosome, complete genomedimethylmenaquinone methyltransferase2e-2099
NC_014974:1076565:108607210860721086740669Thermus scotoductus SA-01 chromosome, complete genomedimethylmenaquinone methyltransferase1e-1480.1
NC_014910:1765065:179211617921161792748633Alicycliphilus denitrificans BC chromosome, complete genomedimethylmenaquinone methyltransferase3e-1375.1
NC_011894:957897:967729967729968400672Methylobacterium nodulans ORS 2060, complete genomeDimethylmenaquinone methyltransferase1e-60232
NC_012792:1091669:110844111084411109112672Variovorax paradoxus S110 chromosome 2, complete genomeDimethylmenaquinone methyltransferase4e-44177
NC_010505:3690000:371358537135853714232648Methylobacterium radiotolerans JCM 2831, complete genomeDimethylmenaquinone methyltransferase1e-36152
NC_010086:1816378:182093918209391821637699Burkholderia multivorans ATCC 17616 chromosome 2, completeDimethylmenaquinone methyltransferase2e-31135
NC_009512:1518113:153624715362471536885639Pseudomonas putida F1, complete genomeDimethylmenaquinone methyltransferase5e-24111
NC_015953:2681331:269576726957672696390624Streptomyces sp. SirexAA-E chromosome, complete genomeDimethylmenaquinone methyltransferase3e-21102
NC_014206:2971304:298171029817102982435726Geobacillus sp. C56-T3 chromosome, complete genomedimethylmenaquinone methyltransferase1e-20100
NC_009050:427000:449720449720450376657Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDimethylmenaquinone methyltransferase1e-1480.1
NC_015065:18189:342723427235108837Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceDimethylmenaquinone methyltransferase3e-1168.6
NC_009511:2726296:274010027401002740816717Sphingomonas wittichii RW1 chromosome, complete genomedimethylmenaquinone methyltransferase8e-1167.4
NC_015563:4206112:421030442103044211011708Delftia sp. Cs1-4 chromosome, complete genomeDimethylmenaquinone methyltransferase1e-0963.5
NC_013526:439813:476172476172476915744Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomedimethylmenaquinone methyltransferase6e-0650.8
NC_011892:352652:361972361972362682711Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeDimethylmenaquinone methyltransferase3e-63241
NC_015137:2616222:262897226289722629649678Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDimethylmenaquinone methyltransferase2e-44178
NC_015389:616430:635976635976636683708Coriobacterium glomerans PW2 chromosome, complete genomeDimethylmenaquinone methyltransferase8e-35147
NC_016582:93754:974799747998117639Streptomyces bingchenggensis BCW-1 chromosome, complete genomedimethylmenaquinone methyltransferase6e-23107
NC_014008:669170:675670675670676317648Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeDimethylmenaquinone methyltransferase9e-1063.5
NC_013729:4871430:488498848849884885644657Kribbella flavida DSM 17836, complete genomeDimethylmenaquinone methyltransferase4e-0754.7
NC_015873:790961:800227800227800916690Megasphaera elsdenii DSM 20460, complete genomedimethylmenaquinone methyltransferase3e-45181
NC_014910:1050706:105552010555201056194675Alicycliphilus denitrificans BC chromosome, complete genomedimethylmenaquinone methyltransferase3e-42171
NC_013093:4890557:490029249002924900882591Actinosynnema mirum DSM 43827, complete genomeDimethylmenaquinone methyltransferase1e-25116
NC_016023:579000:602240602240602860621Bacillus coagulans 36D1 chromosome, complete genomeDimethylmenaquinone methyltransferase6e-21100
NC_015634:652000:652074652074652694621Bacillus coagulans 2-6 chromosome, complete genomeDimethylmenaquinone methyltransferase3e-2098.6
NC_014391:1910273:193815719381571938861705Micromonospora aurantiaca ATCC 27029 chromosome, complete genomedimethylmenaquinone methyltransferase6e-1477.4
NC_010511:3947948:395954139595413960167627Methylobacterium sp. 4-46 chromosome, complete genomedimethylmenaquinone methyltransferase2e-46185
NC_015727:1076927:108099210809921081660669Cupriavidus necator N-1 plasmid BB1p, complete sequencedimethylmenaquinone methyltransferase MenG7e-21100
NC_020911:3046916:306754330675433068232690Octadecabacter antarcticus 307, complete genomehypothetical protein4e-21101
NC_004578:3597083:359752535975253598238714Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1168.9
NC_015458:1692401:170369917036991704172474Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein1e-35149
NC_015733:1976752:199801119980111998688678Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-43175
NC_012522:3038890:304859130485913049262672Rhodococcus opacus B4, complete genomeputative 4-carboxy-4-hydroxy-2-oxoadipate aldolase3e-1478.6
NC_015186:2165628:218785521878552188535681Acidiphilium multivorum AIU301, complete genomeputative 4-carboxy-4-hydroxy-2-oxoadipate aldolase4e-37154
NC_007494:739403:766355766355767011657Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative 4-hydroxy-4-methyl-2-oxoglutarate aldolase9e-1477
NC_015976:814922:820533820533821201669Sphingobium sp. SYK-6, complete genomeputative aldolase6e-1167.8
NC_014258:127500:140638140638141330693Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative demethylmenaquinone methyltransferase2e-30132
NC_007951:2233676:223367622336762234383708Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative dimethylmenaquinone methyltransferase2e-1685.9
NC_013716:3327881:332997333299733330686714Citrobacter rodentium ICC168, complete genomeputative methyl transferase2e-1272.4
NC_008786:2687688:270369327036932704358666Verminephrobacter eiseniae EF01-2, complete genomeputative methyltransferase8e-1167
NC_011992:1505106:151202215120221512528507Acidovorax ebreus TPSY, complete genomeregulator of ribonuclease activity A5e-0858.2
NC_013510:1295439:130282713028271303306480Thermomonospora curvata DSM 43183, complete genomeregulator of ribonuclease activity A2e-1479
NC_009664:4423829:451675045167504517262513Kineococcus radiotolerans SRS30216, complete genomeregulator of ribonuclease activity A5e-1374.3
NC_012560:2315350:232624623262462326734489Azotobacter vinelandii DJ, complete genomeRegulator of ribonuclease activity A, RraA4e-1168.2
NC_009348:3261500:328116932811693281651483Aeromonas salmonicida subsp. salmonicida A449, complete genomeribonuclease activity regulator protein RraA1e-0859.7
NC_021150:2315362:232625823262582326746489Azotobacter vinelandii CA6, complete genomeribonuclease activity regulator protein RraA4e-1168.2
NC_008343:61191:701307013070645516Granulibacter bethesdensis CGDNIH1, complete genomeS-adenosylmethionine:2-demethylmenaquinone methyltransferase5e-1271.2