Pre_GI: BLASTP Hits

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Query: NC_011769:787496:799001 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 799001, End: 800278, Length: 1278

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005863:80843:8084380843828852043Desulfovibrio vulgaris subsp. vulgaris str. Hildenboroughhypothetical protein1e-137489
NC_003552:1259356:1272835127283512741721338Methanosarcina acetivorans C2A, complete genomecapsular polysaccharide biosynthesis protein3e-29129
NC_014254:18193:3767837678390391362Methanohalobium evestigatum Z-7303 plasmid pMETEV01, completecapsular polysaccharide biosynthesis protein2e-28127
NC_015216:808000:8247848247848261061323Methanobacterium sp. AL-21 chromosome, complete genomecapsular polysaccharide biosynthesis protein2e-24114
NC_007517:2241104:2245505224550522469681464Geobacter metallireducens GS-15, complete genomeCapK related-protein1e-23111
NC_002939:2124642:2144092214409221454531362Geobacter sulfurreducens PCA, complete genomecapK related-protein1e-21104
NC_011297:415760:4297774297774311471371Dictyoglomus thermophilum H-6-12, complete genomecapsular polysaccharide biosynthesis protein7e-2098.6
NC_019977:1456366:1469437146943714707231287Methanomethylovorans hollandica DSM 15978, complete genomecoenzyme F390 synthetase2e-1997.1
NC_007298:2568851:2601271260127126026261356Dechloromonas aromatica RCB, complete genomepossible CapK protein4e-1996.3
NC_012918:2850755:2867642286764228690181377Geobacter sp. M21 chromosome, complete genomecoenzyme F390 synthetase2e-1894.4
NC_009051:657000:6658626658626671421281Methanoculleus marisnigri JR1, complete genomeCapK related-protein5e-1789.4
NC_002939:2124642:2137420213742021387601341Geobacter sulfurreducens PCA, complete genomecapK related-protein2e-1687.4
NC_010172:3946644:3946644394664439481521509Methylobacterium extorquens PA1, complete genomeCapK related-protein4e-1686.3
NC_017270:885179:8916938916938928471155Vibrio cholerae LMA3984-4 chromosome chromosome I, completeCapK protein, putative2e-1584.3
NC_014392:1935130:1943128194312819445431416Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomecoenzyme F390 synthetase-like protein2e-1584
NC_016944:975725:9836189836189849581341Vibrio cholerae IEC224 chromosome I, complete sequencephenylacetate-CoA ligase5e-1582.4
NC_016445:452100:4635904635904649301341Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completephenylacetate-CoA ligase5e-1582.4
NC_012582:997268:1008754100875410100941341Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative capK protein5e-1582.4
NC_012578:936000:9440129440129453521341Vibrio cholerae M66-2 chromosome I, complete sequenceputative capK protein5e-1582.4
NC_002505:980595:9865979865979879371341Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completecapK protein, putative5e-1582.4
NC_009457:471337:4773354773354786751341Vibrio cholerae O395 chromosome 2, complete sequencecapK protein1e-1481.6
NC_014935:1704816:1716499171649917178031305Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeamp-dependent synthetase and ligase9e-1581.6
NC_014253:575360:5820365820365833371302Methanohalobium evestigatum Z-7303 chromosome, complete genomePhenylacetate--CoA ligase4e-1479.7
NC_009712:669647:6724826724826737831302Candidatus Methanoregula boonei 6A8, complete genomephenylacetate--CoA ligase1e-1378.2
NC_020409:363114:3655483655483668521305Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePhenylacetate-coenzyme A ligase3e-1273.6
NC_013849:1034472:1056461105646110577561296Ferroglobus placidus DSM 10642 chromosome, complete genomeAMP-dependent synthetase and ligase4e-1273.2
NC_015499:1493500:1500640150064015019441305Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase3e-1273.2
NC_013595:4796436:4811216481121648126611446Streptosporangium roseum DSM 43021, complete genomeCapK domain-containing protein3e-1273.2
NC_014844:3469848:3475669347566934769341266Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAMP-dependent synthetase and ligase5e-1272.8
NC_002570:207555:2130302130302143671338Bacillus halodurans C-125, complete genomephenylacetyl-CoA ligase in the phenylacetic acid catabolic pathway1e-1171.6
NC_018876:2604055:2617254261725426185581305Methanolobus psychrophilus R15 chromosome, complete genomephenylacetate-CoA ligase2e-1170.9
NC_015633:2327500:2338518233851823398401323Vibrio anguillarum 775 chromosome chromosome I, complete sequenceCapK2e-1170.9
NC_010612:103081:1306391306391320271389Mycobacterium marinum M, complete genomehypothetical protein9e-1168.6
NC_015499:1640500:1654187165418716554491263Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase3e-1067
NC_015275:4577642:4586034458603445873501317Clostridium lentocellum DSM 5427 chromosome, complete genomePhenylacetate--CoA ligase5e-1066.2
NC_016803:2431672:2436907243690724381721266Desulfovibrio desulfuricans ND132 chromosome, complete genomeAMP-dependent synthetase and ligase9e-1065.1
NC_016112:3103716:312534731253473125985639Methylomicrobium alcaliphilum chromosome, complete genomeCapK protein (fragment)1e-0965.1
NC_009483:2489000:2490625249062524919291305Geobacter uraniireducens Rf4 chromosome, complete genomephenylacetate--CoA ligase1e-0964.7
NC_020133:77341:921469214693069924Mycobacterium liflandii 128FXT, complete genomeCoenzyme F390 synthetase1e-0964.7
NC_012214:124337:1328071328071341891383Erwinia pyrifoliae Ep1/96, complete genomeCapK protein3e-0963.5
NC_012108:2220983:2249625224962522510011377Desulfobacterium autotrophicum HRM2, complete genomeputative coenzyme F390 synthetase FtsA9e-0962
NC_008009:4479648:4483709448370944851361428Acidobacteria bacterium Ellin345, complete genomeCapK protein, putative2e-0860.8
NC_013204:74855:7619876198774391242Eggerthella lenta DSM 2243, complete genomePhenylacetate--CoA ligase2e-0860.8
NC_013741:302415:3191133191133203631251Archaeoglobus profundus DSM 5631, complete genomePhenylacetate--CoA ligase2e-0860.8
NC_015733:2963548:2985941298594129872601320Pseudomonas putida S16 chromosome, complete genomephenylacetate-CoA ligase3e-0860.1
NC_018691:896464:9006069006069019011296Alcanivorax dieselolei B5 chromosome, complete genomePhenylacetate-CoA ligase5e-0859.3
NC_020409:1956485:1963804196380419651141311Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRelated to coenzyme F390 synthetase6e-0858.9
NC_016027:2512297:2534465253446525357931329Gluconacetobacter xylinus NBRC 3288, complete genomephenylacetate-CoA ligase2e-0757
NC_009712:669647:6737836737836750541272Candidatus Methanoregula boonei 6A8, complete genomephenylacetate--CoA ligase3e-0756.6
NC_007759:415456:4336014336014350731473Syntrophus aciditrophicus SB, complete genomecoenzyme F390 Synthetase / phenylacetate-coenzyme A ligase1e-0655.1
NC_017955:1611037:1630447163044716318831437Modestobacter marinus, complete genomecoenzyme F390 synthetase1e-0655.1