Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:4577642 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
45776424578637996hypothetical proteinBLASTP
457866445796921029hypothetical proteinBLASTP
457985245822242373transglutaminase domain-containing proteinQuickGO ontologyBLASTP
45824674582679213hypothetical protein
45828394583717879Pyruvate synthaseQuickGO ontologyBLASTP
458371945850471329Pyruvate synthaseQuickGO ontologyBLASTP
45850344585351318pyruvate ferredoxinflavodoxin oxidoreductase delta subunitQuickGO ontologyBLASTP
45853524585921570pyruvateketoisovalerate oxidoreductase gamma subunitQuickGO ontologyBLASTP
458603445873501317Phenylacetate--CoA ligaseQuickGO ontologyBLASTP
458738845886021215CysMet metabolism pyridoxal-phosphate-dependent proteinQuickGO ontologyBLASTP
458865245900161365D-lactate dehydrogenase cytochromeQuickGO ontologyBLASTP
45900744590964891NLPA lipoproteinQuickGO ontologyBLASTP
45910194591675657ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
459167245926911020Phosphonate-transporting ATPaseQuickGO ontologyBLASTP
459270345938601158aminotransferase class I and IIQuickGO ontologyBLASTP
459448545956091125CysMet metabolism pyridoxal-phosphate-dependent proteinQuickGO ontologyBLASTP
459559645971731578Cysteine synthaseQuickGO ontologyBLASTP