Pre_GI: BLASTP Hits

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Query: NC_011745:2209288:2218310 Escherichia coli ED1a chromosome, complete genome

Start: 2218310, End: 2219875, Length: 1566

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016803:1646342:1659768165976816613661599Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-95347
NC_015259:734795:7492687492687504401173Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative Restriction modification system, type I hsdS4e-55216
NC_016027:1902854:1926268192626819274581191Gluconacetobacter xylinus NBRC 3288, complete genometype I DNA specificity S subunit1e-52207
NC_011083:4547825:4598267459826745994091143Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,restriction modification system DNA specificity domain1e-49197
NC_015578:3495034:350381135038113504440630Treponema primitia ZAS-2 chromosome, complete genometype I site-specific deoxyribonuclease1e-48194
NC_012917:3241196:3252422325242232535941173Pectobacterium carotovorum subsp. carotovorum PC1, complete genomerestriction modification system DNA specificity domain protein2e-47190
NC_015125:1668780:1680807168080716819851179Microbacterium testaceum StLB037, complete genomerestriction endonuclease S subunits7e-38158
NC_008705:4053070:4064342406434240656011260Mycobacterium sp. KMS, complete genomerestriction endonuclease S subunits-like protein8e-30132
NC_008146:4019711:4029860402986040311191260Mycobacterium sp. MCS, complete genomeRestriction endonuclease S subunits-like protein8e-30132
NC_016803:593484:6016666016666031651500Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-29130
NC_006361:2920028:2925616292561629268001185Nocardia farcinica IFM 10152, complete genomeputative restriction-modification system specificity determinant4e-29129
NC_007908:1108494:1128342112834211295351194Rhodoferax ferrireducens T118, complete genomerestriction modification system DNA specificity domain1e-28128
NC_014974:758129:7645347645347655921059Thermus scotoductus SA-01 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-28126
NC_016147:2337244:2348124234812423492871164Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-27123
NC_014640:6815264:6824393682439368255951203Achromobacter xylosoxidans A8 chromosome, complete genometype I restriction enzyme StySPI specificity protein6e-24112
NC_011138:3881446:3898916389891638999981083Alteromonas macleodii 'Deep ecotype', complete genometype I site-specific deoxyribonuclease3e-23110
CP002516:4236680:4251283425128342524491167Escherichia coli KO11, complete genomerestriction modification system DNA specificity domain protein2e-23110
NC_016902:4236680:4251283425128342524491167Escherichia coli KO11FL chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-23110
CP002185:4750571:4760420476042047614871068Escherichia coli W, complete genomehypothetical protein2e-23110
NC_013720:5769910:5786880578688057884331554Pirellula staleyi DSM 6068, complete genomerestriction modification system DNA specificity subunit4e-23109
NC_014365:2810405:2832411283241128336461236Desulfarculus baarsii DSM 2075 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-22107
NC_007644:1694879:1707326170732617086541329Moorella thermoacetica ATCC 39073, complete genomeRestriction modification system DNA specificity domain7e-22105
NC_010814:1441327:1458977145897714603201344Geobacter lovleyi SZ, complete genomerestriction modification system DNA specificity domain3e-21103
NC_008346:584305:609301609301610092792Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system (specificity subunit)8e-21102
NC_018604:2579000:2603755260375526049511197Brachyspira pilosicoli WesB complete genometype I restriction-modification enzyme S subunit2e-20100
NC_015216:1102837:1118283111828311194941212Methanobacterium sp. AL-21 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-2099.8
NC_009925:647752:6642866642866654341149Acaryochloris marina MBIC11017, complete genometype I restriction-modification enzyme S subunit9e-2099
NC_016593:416661:4224874224874236651179Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein3e-1894
NC_010498:4856011:4859524485952448608101287Escherichia coli SMS-3-5, complete genometype I restriction modification DNA specificity domain-containing protein4e-1893.2
NC_009338:817854:8285608285608296661107Mycobacterium gilvum PYR-GCK chromosome, complete genomerestriction modification system DNA specificity subunit2e-1791.3
NC_015850:1155376:1165221116522111689823762Acidithiobacillus caldus SM-1 chromosome, complete genomerestriction-modification protein4e-1790.1
NC_006510:372826:3786463786463796861041Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system S subunit4e-1789.7
NC_013203:1351941:1375039137503913764181380Atopobium parvulum DSM 20469, complete genomehypothetical protein6e-1789.4
NC_016631:3917253:3956143395614339576421500Granulicella mallensis MP5ACTX8 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein9e-1788.6
NC_008312:3728329:3735023373502337362311209Trichodesmium erythraeum IMS101, complete genomerestriction modification system DNA specificity domain4e-1686.7
NC_016612:2009927:2032911203291120339721062Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction enzyme StySPI specificity protein9e-1685.5
NC_013203:202008:2370032370032381631161Atopobium parvulum DSM 20469, complete genomerestriction modification system DNA specificity domain protein9e-1685.5
NC_015945:1908895:1919789191978919209491161Muricauda ruestringensis DSM 13258 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1584
NC_016887:3286436:3326449332644933275851137Nocardia cyriacigeorgica GUH-2, complete genomeType I restriction-modification enzyme S subunit, specificity-determinant3e-1583.6
NC_015737:449914:4612094612094623541146Clostridium sp. SY8519, complete genomehypothetical protein4e-1583.6
NC_011979:3112911:3123744312374431256781935Geobacter sp. FRC-32, complete genomeRestriction endonuclease S subunit-like protein5e-1583.2
NC_008577:2402165:2425817242581724269921176Shewanella sp. ANA-3 chromosome 1, complete sequencerestriction modification system DNA specificity domain1e-1481.6
NC_011726:3051408:307105630710563071772717Cyanothece sp. PCC 8801, complete genomerestriction modification system DNA specificity domain protein2e-1481.3
NC_014206:411143:4175314175314187451215Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1480.5
NC_020211:554736:5721105721105732821173Serratia marcescens WW4, complete genomerestriction modification system DNA specificity subunit3e-1480.1
NC_007645:5160133:5182397518239751836171221Hahella chejuensis KCTC 2396, complete genomeRestriction endonuclease S subunit1e-1378.6
NC_009051:1074993:1084146108414610853301185Methanoculleus marisnigri JR1, complete genomerestriction modification system DNA specificity domain5e-1376.3
NC_016051:1005188:1012531101253110138171287Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system specificity subunit S1e-1275.5
NC_013446:1724000:1729654172965417309431290Comamonas testosteroni CNB-2, complete genomehypothetical protein1e-1275.1
NC_016745:1548426:1556423155642315582191797Oceanimonas sp. GK1 chromosome, complete genometype I restriction-modification system specificity3e-1273.9
NC_015953:2349503:2376073237607323773111239Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-1273.2
NC_007777:4796627:4796627479662747979371311Frankia sp. CcI3, complete genomerestriction modification system DNA specificity domain5e-1272.8
NC_014168:2820315:2831141283114128324901350Segniliparus rotundus DSM 44985 chromosome, complete genomerestriction endonuclease S subunit-like protein2e-1170.9
NC_013799:1:1649316493177731281Hydrogenobacter thermophilus TK-6, complete genomerestriction endonuclease S subunit7e-1169.3
NC_017161:1:1655416554178341281Hydrogenobacter thermophilus TK-6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-1169.3
NC_013730:3729626:3747015374701537485771563Spirosoma linguale DSM 74, complete genomerestriction modification system DNA specificity domain protein7e-1169.3
NC_012691:1250385:1256400125640012575151116Tolumonas auensis DSM 9187, complete genomerestriction modification system DNA specificity domain protein9e-1168.9
NC_016609:4233701:4258812425881242602511440Niastella koreensis GR20-10 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1068.6
NC_010468:4059436:4070347407034740721041758Escherichia coli ATCC 8739, complete genomerestriction modification system DNA specificity domain2e-1067.8
NC_013716:3512950:3521977352197735235931617Citrobacter rodentium ICC168, complete genomeputative type I restriction modification system HsdS component3e-1067
NC_012759:4501206:4516575451657545179691395Escherichia coli BW2952 chromosome, complete genomeEcoKI restriction-modification system protein HsdS4e-1066.6
AC_000091:4569379:4584748458474845861421395Escherichia coli W3110 DNA, complete genomespecificity determinant for hsdM and hsdR4e-1066.6
NC_015578:3495034:3501621350162135027361116Treponema primitia ZAS-2 chromosome, complete genometype I restriction-modification system S subunit4e-1066.6
NC_015740:141910:1526751526751538201146Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeType I restriction modification DNA specificity domain-containing protein8e-1065.5
NC_013949:939695:9490009490009502861287Helicobacter mustelae 12198 chromosome, complete genometype I restriction-modification system S protein1e-0965.5
NC_012962:4591295:4596402459640245975351134Photorhabdus asymbiotica, complete genometype i restriction enzyme ecobi specificity protein (s protein (s.ecobi)1e-0965.1
NC_015953:3227000:3236026323602632372041179Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0965.1
NC_017068:2055500:2066538206653820676681131Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system specificity subunit1e-0965.1
NC_013406:1217385:1237662123766212388161155Paenibacillus sp. Y412MC10 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0965.1
NC_011071:1178423:1189714118971411908081095Stenotrophomonas maltophilia R551-3, complete genomerestriction modification system DNA specificity domain2e-0964.7
NC_008278:5399715:5418092541809254194231332Frankia alni ACN14a, complete genomeType I restriction-modification system, S subunit2e-0964.7
NC_009832:4521585:4538281453828145395101230Serratia proteamaculans 568, complete genomerestriction modification system DNA specificity domain2e-0964.3
NC_017986:1885613:1908432190843219101171686Pseudomonas putida ND6 chromosome, complete genomerestriction modification system DNA specificity subunit3e-0963.5
NC_012793:1718000:1721130172113017224161287Geobacillus sp. WCH70, complete genomerestriction modification system DNA specificity domain protein4e-0963.2
NC_014934:244587:2445872445872461101524Cellulophaga algicola DSM 14237 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-0963.2
NC_010939:321492:3299713299713311371167Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative Type I restriction enzyme EcoR124II specificity protein5e-0962.8
NC_015562:755785:7636407636407649591320Methanotorris igneus Kol 5 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-0962.8
NC_015696:285456:2951282951282962971170Francisella sp. TX077308 chromosome, complete genometype I restriction-modification system, specificity subunit S1e-0862
NC_008751:1043269:1053152105315210549391788Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain3e-0860.8
NC_009720:1248866:1263097126309712644491353Xanthobacter autotrophicus Py2, complete genomerestriction modification system DNA specificity subunit4e-0860.1
NC_011832:913994:9247349247349261491416Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein7e-0859.3
NC_020054:4161049:4178338417833841795761239Fibrella aestuarina BUZ 2 drat genometype I restriction enzyme, S subunit2e-0758.2
NC_014220:1162948:1167996116799611692641269Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-0757
NC_008571:744500:7506847506847519401257Gramella forsetii KT0803, complete genometype I restriction-modification system DNA speci ficity subunit5e-0756.6
NC_010170:4196197:4209964420996442123572394Bordetella petrii, complete genometype I restriction-modification system, S subunit6e-0756.2
NS_000195:526983:5454715454715479842514Candidatus Cloacamonas acidaminovoransRestriction modification system DNA specificity domain:N-6 DNA methylase:Type I restriction-modification system, M subunit6e-0756.2
NC_011666:1661491:1673298167329816746171320Methylocella silvestris BL2, complete genometype I restriction enzyme1e-0655.1
NC_009523:907775:9102129102129113901179Roseiflexus sp. RS-1 chromosome, complete genomerestriction modification system DNA specificity subunit1e-0655.1
NC_008787:685401:7055047055047067721269Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction modification DNA specificity domain protein2e-0654.7
NC_015422:2126614:2142598214259821440221425Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-0654.7
NC_010364:84900:9158891588930151428Halobacterium salinarum R1, complete genometype I site-specific deoxyribonuclease subunit rmeS2e-0654.3
NC_002607:81452:8916089160905871428Halobacterium sp. NRC-1, complete genomeRmeS2e-0654.3
NC_004342:3164500:3178062317806231792971236Leptospira interrogans serovar Lai str. 56601 chromosome I,Type I restriction enzyme EcoprrI specificity protein5e-0653.1
NC_008942:815280:8215758215758229151341Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-0552