Pre_GI: BLASTP Hits

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Query: NC_011368:678291:692701 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,

Start: 692701, End: 692997, Length: 297

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:4066926:408467240846724084956285Methylobacterium nodulans ORS 2060, complete genomeferredoxin-like protein2e-33140
NC_011420:3822765:382765338276533827931279Rhodospirillum centenum SW, complete genomeferredoxin-like protein, FixX1e-30131
NC_017249:8283701:831940883194088319704297Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-30131
NC_004463:1898648:193478819347881935084297Bradyrhizobium japonicum USDA 110, complete genomeprobable ferredoxin1e-30131
NC_010529:296500:323613323613323912300Cupriavidus taiwanensis plasmid pRALTA, complete sequenceferredoxin-like protein2e-23107
NC_013520:120214:140668140668140946279Veillonella parvula DSM 2008, complete genomeputative ferredoxin3e-1684
NC_009901:4899535:490937549093754909662288Shewanella pealeana ATCC 700345, complete genomeputative ferredoxin5e-1682.8
NC_021171:4588792:459628845962884596572285Bacillus sp. 1NLA3E, complete genomehypothetical protein7e-1682.4
NC_012880:1585255:160474616047461605039294Dickeya dadantii Ech703, complete genomeferredoxin-like protein3e-1580.5
NC_007907:4859735:488300248830024883289288Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1477.8
NC_008554:4781500:478418647841864784473288Syntrophobacter fumaroxidans MPOB, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein2e-1374.7
NC_009376:2102536:211883221188322119122291Pyrobaculum arsenaticum DSM 13514 chromosome, complete genome4Fe-4S ferredoxin4e-1270.1
NC_016885:2091918:216659421665942166884291Pyrobaculum oguniense TE7 chromosome, complete genomeFerredoxin-like protein4e-1270.1
NC_003364:402268:401981401981402271291Pyrobaculum aerophilum str. IM2, complete genomeferredoxin like protein5e-1269.7
NC_016645:1838405:184980318498031850093291Pyrobaculum sp. 1860 chromosome, complete genomeferredoxin-like protein7e-1269.3
NC_015738:1925997:192614419261441926440297Eggerthella sp. YY7918, complete genomeferredoxin-like protein9e-1268.9
NC_009800:2889928:291115129111512911411261Escherichia coli HS, complete genomeputative ferredoxin8e-1165.9
NC_019791:1272850:131000813100081310319312Caldisphaera lagunensis DSM 15908 chromosome, complete genomeferredoxin-like protein1e-1065.5
NC_012589:2426242:243286224328622433149288Sulfolobus islandicus L.S.2.15, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-1064.3
NC_012588:2297497:230250223025022302789288Sulfolobus islandicus M.14.25 chromosome, complete genome4Fe-4S ferredoxin2e-1064.3
NC_012622:2376405:238360923836092383896288Sulfolobus islandicus Y.G.57.14 chromosome, complete genome4Fe-4S ferredoxin2e-1064.3
NC_012623:231603:242768242768243055288Sulfolobus islandicus Y.N.15.51 chromosome, complete genome4Fe-4S ferredoxin2e-1064.3
NC_012632:2390831:239583623958362396123288Sulfolobus islandicus M.16.27 chromosome, complete genome4Fe-4S ferredoxin2e-1064.3
NC_012726:2287880:229288522928852293172288Sulfolobus islandicus M.16.4 chromosome, complete genome4Fe-4S ferredoxin2e-1064.3
NC_013769:2405248:241567624156762415963288Sulfolobus islandicus L.D.8.5 chromosome, complete genome4Fe-4S ferredoxin2e-1064.3
NC_017275:2327479:233495323349532335240288Sulfolobus islandicus HVE10/4 chromosome, complete genome4Fe-4S ferredoxin2e-1064.3
NC_017276:2283933:229786122978612298148288Sulfolobus islandicus REY15A chromosome, complete genome4Fe-4S ferredoxin2e-1064.3
NC_003106:1786000:179134017913401791621282Sulfolobus tokodaii str. 7, complete genomehypothetical ferredoxin9e-1062.4
NC_014218:1485568:149215614921561492452297Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomehypothetical protein1e-0962
NC_010468:1029471:102922010292201029480261Escherichia coli ATCC 8739, complete genomehypothetical protein1e-0962
NC_000913:2873443:289194128919412892201261Escherichia coli K12, complete genomepredicted 4Fe-4S cluster-containing protein1e-0961.6
AC_000091:2872000:289257528925752892835261Escherichia coli W3110 DNA, complete genomepredicted 4Fe-4S cluster-containing protein1e-0961.6
NC_010473:2963951:298448329844832984743261Escherichia coli str. K-12 substr. DH10B, complete genomepredicted 4Fe-4S cluster-containing protein1e-0961.6
NC_012759:2757826:277775327777532778013261Escherichia coli BW2952 chromosome, complete genomeputative 4Fe-4S cluster-containing protein1e-0961.6
NC_016516:2314115:232510323251032325405303Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeFerredoxin-like protein fixX1e-0858.5
NC_016512:2322598:233358723335872333889303Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeFerredoxin-like protein fixX1e-0858.5
NC_016511:2321999:233424523342452334547303Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeFerredoxin-like protein fixX1e-0858.5
NC_015172:1120000:113103511310351131337303Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein1e-0858.5
NC_009328:814530:861529861529861816288Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeferredoxin1e-0652