Some Help

Query: NC_011274:376970 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 376970, End: 399599, Length: 22630

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011080:38344138344140609922659Salmonella enterica subsp. enterica serovar Newport str. SL254,042530BLASTN svgBLASTP svg
NC_011149:36176536176538459922835Salmonella enterica subsp. enterica serovar Agona str. SL483,042530BLASTN svgBLASTP svg
NC_011083:40302240302245026847247Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,042410BLASTN svgBLASTP svg
NC_010102:27213742721374274466823295Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,033910BLASTN svgBLASTP svg
NC_006511:24677632467763249158023818Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC025550BLASTN svgBLASTP svg
NC_003198:37884437884440275223909Salmonella enterica subsp. enterica serovar Typhi str. CT18,025240BLASTN svgBLASTP svg
NC_004631:2584244*2584244260559921356Salmonella enterica subsp. enterica serovar Typhi Ty2, complete025230BLASTN svgBLASTP svg
NC_006905:40115440115443134930196Salmonella enterica subsp. enterica serovar Choleraesuis str014730BLASTN svgBLASTP svg
NC_003197:36743036743038660919180Salmonella typhimurium LT2, complete genome014210BLASTN svgBLASTP svg
NC_006905:1961774*1961774198409922326Salmonella enterica subsp. enterica serovar Choleraesuis str0684BLASTN svgBLASTP svg
NC_010067:24881412488141251937331233Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete7e-115422BLASTN svgBLASTP svg
NC_011992:12137261213726123279819073Acidovorax ebreus TPSY, complete genome4e-82313BLASTN svgBLASTP svg
NC_011770:28042182804218282883824621Pseudomonas aeruginosa LESB58, complete genome4e-82313BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome4e-79303BLASTN svgBLASTP svg
NC_009648:293052*29305232674733696Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-28135BLASTN svgBLASTP svg
NC_008750:12533541253354128321029857Shewanella sp. W3-18-1, complete genome3e-27131BLASTN svgBLASTP svg
NC_011887:72364723649735524992Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete3e-21111BLASTN svgBLASTP svg
NC_013716:31097003109700314990540206Citrobacter rodentium ICC168, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008027:23972552397255242125624002Pseudomonas entomophila L48, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015856:30597373059737308304923313Collimonas fungivorans Ter331 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015062:58826588268328124456Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010688:32298203229820327221942400Xanthomonas campestris pv. campestris, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020063:23438132343813236609922287Enterobacteriaceae bacterium strain FGI 57, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014562:14028631402863142199619134Pantoea vagans C9-1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008344:49039*4903913459985561Nitrosomonas eutropha C91, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_018868:61911361911367007150959Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010170:47399254739925476955229628Bordetella petrii, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021066:53421275342127536560823482Raoultella ornithinolytica B6, complete genome7e-0763.9BLASTN svgBLASTP svg
CP002185:3627992*3627992365209924108Escherichia coli W, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015663:3586836*3586836361030823473Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg