Pre_GI: BLASTP Hits

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Query: NC_011094:1166271:1170294 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1170294, End: 1170425, Length: 132

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:1186097:119012011901201190251132Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-1684.7
NC_006905:1186895:119091811909181191049132Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-1684.7
NC_011149:1077589:108161210816121081743132Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-1684.7
NC_016832:1838220:185582218558221855950129Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1684.3
NC_010102:1979742:199630019963001996431132Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-1682.4
NC_011080:1209935:121395812139581214089132Salmonella enterica subsp. enterica serovar Newport str. SL254,8e-1682.4