Pre_GI: BLASTP Hits

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Query: NC_010501:5442000:5450842 Pseudomonas putida W619, complete genome

Start: 5450842, End: 5451822, Length: 981

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:734363:757539757539758519981Pseudomonas putida W619, complete genomephage integrase5e-150530
NC_016830:381049:392430392430393407978Pseudomonas fluorescens F113 chromosome, complete genomephage integrase2e-139494
NC_020209:5077410:5090808509080850925711764Pseudomonas poae RE*1-1-14, complete genomephage integrase6e-133473
NC_007492:857428:875977875977876957981Pseudomonas fluorescens PfO-1, complete genomePhage integrase3e-125447
NC_017986:1885613:190477419047741905754981Pseudomonas putida ND6 chromosome, complete genomephage integrase family protein1e-118426
NC_007404:974461:100104010010401001963924Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein8e-36151
NC_011083:1524337:153674015367401537705966Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phage integrase family protein1e-29130
NC_009512:755658:763489763489763653165Pseudomonas putida F1, complete genome9e-22104
NC_008740:1484531:149853214985321499452921Marinobacter aquaeolei VT8, complete genomehypothetical protein9e-1787.8
NC_007520:903799:905931905931906827897Thiomicrospira crunogena XCL-2, complete genomehypothetical protein2e-1687
NC_017986:1885613:189024518902451891219975Pseudomonas putida ND6 chromosome, complete genomeputative phage integrase8e-1581.3
NC_012660:5793200:580167858016785802652975Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase9e-1064.7
NC_017223:3345902:335150233515023352203702Bordetella pertussis CS chromosome, complete genome1e-0963.9
NC_002929:3305682:331128233112823311983702Bordetella pertussis Tohama I, complete genome1e-0963.9
NC_007761:2071500:207329720732972074172876Rhizobium etli CFN 42, complete genomeputative integrase protein4e-0859.3
NC_009434:3434381:345266034526603453523864Pseudomonas stutzeri A1501, complete genomeintegrase5e-0755.5
NC_008786:4579490:4580576458057645817361161Verminephrobacter eiseniae EF01-2, complete genomephage integrase, N-terminal SAM-like protein8e-0754.7
NC_009445:6621996:666222866622286663148921Bradyrhizobium sp. ORS 278 chromosome, complete genomeDNA breaking-rejoining protein1e-0654.3