Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2072696 Escherichia coli HS, complete genome

Start: 2072696, End: 2073781, Length: 1086

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009436:2776410:2792576279257627936551080Enterobacter sp. 638, complete genomebacteriophage Mu P family protein1e-38160
NC_011742:2823000:2843159284315928442381080Escherichia coli S88 chromosome, complete genomeTail protein3e-38159
NC_007946:2894793:2910822291082229119011080Escherichia coli UTI89, complete genomebacteriophage V tail protein3e-38159
NC_008563:2909945:2925849292584929269281080Escherichia coli APEC O1, complete genomeputative tail protein3e-38159
NC_011740:621408:6214086214086224871080Escherichia fergusonii ATCC 35469, complete genomeTail protein4e-38159
NC_008258:269806:2698062698062708851080Shigella flexneri 5 str. 8401, complete genometail protein7e-38158
NC_011750:2928990:2942646294264629437251080Escherichia coli IAI39 chromosome, complete genometail protein5e-37155
NC_011094:2115750:2132209213220921332671059Salmonella enterica subsp. enterica serovar Schwarzengrund strbacteriophage Mu P protein4e-37155
NC_011294:2009388:2025244202524420263021059Salmonella enterica subsp. enterica serovar Enteritidis strphage tail protein4e-37155
NC_016810:2027311:2046527204652720475851059Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage tail protein4e-37155
NC_016856:2085283:2100364210036421014221059Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stail protein4e-37155
NC_016857:2027311:2046527204652720475851059Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Tail protein4e-37155
NC_017046:2026672:2045888204588820469461059Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail protein4e-37155
NC_010102:1779707:1804812180481218058701059Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-37155
NC_016863:2029340:2048556204855620496141059Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-36153
NC_002937:2933000:2953962295396229550951134Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative2e-35149
NC_011205:2137696:2153544215354421546081065Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-34147
NC_002937:255790:2557902557902569231134Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative1e-34147
NC_002947:4362271:4386415438641543875241110Pseudomonas putida KT2440, complete genomephage tail protein, putative5e-33142
NC_014228:3282500:3309177330917733102651089Xenorhabdus nematophila ATCC 19061, complete genomeputative tail protein2e-32139
NC_012721:2694829:2719548271954827207171170Burkholderia glumae BGR1 chromosome 2, complete genomePutative tail protein3e-23109
NC_012751:1071589:107158910715891072230642Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeMu-like phage P protein5e-1892.4
NC_002927:3827211:3839659383965938407621104Bordetella bronchiseptica RB50, complete genomeputative phage tail protein3e-0859.7
NC_013971:335247:346889346889347026138Erwinia amylovora ATCC 49946 chromosome, complete genomephage protein (partial)8e-0858.5
NC_011365:592256:6337756337756348781104Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeMu-like protein prophage tail protein gpP-like protein8e-0755.1