Query: NC_009664:3718927 Kineococcus radiotolerans SRS30216, complete genome
Start: 3718927, End: 3747055, Length: 28129
Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015671:1540860 | 1540860 | 1564781 | 23922 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 0 | 1049 | BLASTN svg | BLASTP svg |
NC_015588:1965787 | 1965787 | 1988575 | 22789 | Isoptericola variabilis 225 chromosome, complete genome | 0 | 918 | BLASTN svg | BLASTP svg |
NC_018750:2005229 | 2005229 | 2030592 | 25364 | Streptomyces venezuelae ATCC 10712, complete genome | 0 | 916 | BLASTN svg | BLASTP svg |
NC_015514:2414617 | 2414617 | 2438740 | 24124 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 0 | 908 | BLASTN svg | BLASTP svg |
NC_003888:2305901 | 2305901 | 2329452 | 23552 | Streptomyces coelicolor A3(2), complete genome | 0 | 844 | BLASTN svg | BLASTP svg |
NC_014151:2312000 | 2312000 | 2334742 | 22743 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 0 | 825 | BLASTN svg | BLASTP svg |
NC_021177:1922930 | 1922930 | 1947041 | 24112 | Streptomyces fulvissimus DSM 40593, complete genome | 0 | 807 | BLASTN svg | BLASTP svg |
NC_010572:6293417 | 6293417 | 6316466 | 23050 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 0 | 805 | BLASTN svg | BLASTP svg |
NC_012803:1302261 | 1302261 | 1323804 | 21544 | Micrococcus luteus NCTC 2665, complete genome | 0 | 803 | BLASTN svg | BLASTP svg |
NC_014210:3763940* | 3763940 | 3791099 | 27160 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 0 | 741 | BLASTN svg | BLASTP svg |
NC_015953:1756493 | 1756493 | 1778424 | 21932 | Streptomyces sp. SirexAA-E chromosome, complete genome | 0 | 733 | BLASTN svg | BLASTP svg |
NC_013169:1661135* | 1661135 | 1680099 | 18965 | Kytococcus sedentarius DSM 20547, complete genome | 0 | 726 | BLASTN svg | BLASTP svg |
NC_010617:1428902 | 1428902 | 1452260 | 23359 | Kocuria rhizophila DC2201, complete genome | 1e-166 | 595 | BLASTN svg | BLASTP svg |
NC_013510:1786194* | 1786194 | 1813698 | 27505 | Thermomonospora curvata DSM 43183, complete genome | 3e-136 | 494 | BLASTN svg | BLASTP svg |
NC_009480:1261961* | 1261961 | 1287331 | 25371 | Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete | 2e-131 | 478 | BLASTN svg | BLASTP svg |
NC_013441:2788806 | 2788806 | 2822181 | 33376 | Gordonia bronchialis DSM 43247, complete genome | 9e-90 | 339 | BLASTN svg | BLASTP svg |
NC_008726:3915979 | 3915979 | 3941872 | 25894 | Mycobacterium vanbaalenii PYR-1, complete genome | 5e-82 | 313 | BLASTN svg | BLASTP svg |
NC_010407:1775227 | 1775227 | 1800548 | 25322 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 4e-49 | 204 | BLASTN svg | BLASTP svg |
NC_019673:1656680 | 1656680 | 1681722 | 25043 | Saccharothrix espanaensis DSM 44229 complete genome | 5e-42 | 180 | BLASTN svg | BLASTP svg |
NC_014210:3742112 | 3742112 | 3762356 | 20245 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 7e-29 | 137 | BLASTN svg | BLASTP svg |
NC_013235:4045589 | 4045589 | 4068148 | 22560 | Nakamurella multipartita DSM 44233, complete genome | 3e-22 | 115 | BLASTN svg | BLASTP svg |
NC_004369:2203947 | 2203947 | 2227665 | 23719 | Corynebacterium efficiens YS-314, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_012791:721813 | 721813 | 761147 | 39335 | Variovorax paradoxus S110 chromosome 1, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007947:1556437* | 1556437 | 1581193 | 24757 | Methylobacillus flagellatus KT, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_015186:2884866 | 2884866 | 2904382 | 19517 | Acidiphilium multivorum AIU301, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_019964:1961237* | 1961237 | 1986082 | 24846 | Halovivax ruber XH-70, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010172:57500 | 57500 | 117162 | 59663 | Methylobacterium extorquens PA1, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009956:88354 | 88354 | 117893 | 29540 | Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequence | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008752:3902637* | 3902637 | 3937513 | 34877 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015379:89441* | 89441 | 117816 | 28376 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007508:1446526* | 1446526 | 1471986 | 25461 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015387:1965711 | 1965711 | 1989011 | 23301 | Marinithermus hydrothermalis DSM 14884 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |