Pre_GI: BLASTP Hits

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Query: NC_009656:1994392:2038733 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 2038733, End: 2039275, Length: 543

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009832:3500000:350540635054063505966561Serratia proteamaculans 568, complete genometranscriptional regulator, TetR family3e-1271.6
NC_014837:3739408:374879137487913749378588Pantoea sp. At-9b chromosome, complete genomeTetR family transcriptional regulator4e-1270.9
NC_011663:2568190:258893725889372589494558Shewanella baltica OS223 chromosome, complete genomeTetR family transcriptional regulator2e-1168.9
NC_014258:127500:128454128454129002549Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator3e-1167.8
NC_013929:8474195:850754385075438508133591Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator4e-1167.4
NC_014310:1086183:109337610933761093957582Ralstonia solanacearum PSI07 megaplasmid, complete sequencetranscriptional regulator, tetr family2e-1065.5
NC_012660:3689223:369128836912883691878591Pseudomonas fluorescens SBW25 chromosome, complete genomeTetR family transcriptional regulator3e-1064.7
NC_014539:743523:770361770361770942582Burkholderia sp. CCGE1003 chromosome 1, complete sequenceregulatory protein TetR5e-1063.9
NC_018868:2935580:295135029513502951889540Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometranscriptional regulator1e-0962.4
NC_012968:1191037:120521612052161205824609Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family1e-0962.4
NC_008712:215499:221110221110221676567Arthrobacter aurescens TC1 plasmid TC1, complete sequenceputative Transcriptional regulator, TetR family2e-0961.6
NC_014306:642152:655932655932656531600Erwinia billingiae Eb661, complete genomeTranscriptional regulator, TetR family5e-0960.5
NC_015856:4301230:431541643154164316036621Collimonas fungivorans Ter331 chromosome, complete genomeTetR family transcriptional regulator7e-0960.1
NC_016582:1639375:167531116753111675883573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative TetR family regulator1e-0859.7
NC_013592:1602242:160886316088631609432570Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family1e-0859.7
NC_012969:1442147:145618814561881456784597Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeTetR family transcriptional regulator2e-0858.9
NC_018750:6237875:625588762558876256447561Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, TetR family2e-0858.5
NC_014217:800406:805701805701806249549Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, TetR family2e-0858.2
NC_013595:6978614:698322669832266983801576Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family4e-0857.8
NC_004129:3123000:312514131251413125728588Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, TetR family4e-0857.8
NC_015953:46732:631566315663755600Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator4e-0857.4
NC_010338:588000:588037588037588642606Caulobacter sp. K31, complete genometranscriptional regulator, TetR family8e-0856.6
NC_013592:3212834:322058632205863221164579Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family1e-0755.8
NC_002944:1881405:188140518814051882076672Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-0755.5
NC_011983:1746000:174603617460361746614579Agrobacterium radiobacter K84 chromosome 2, complete genometranscriptional regulator protein2e-0755.1
NC_014310:1086183:109266710926671093143477Ralstonia solanacearum PSI07 megaplasmid, complete sequencetranscriptional regulator, tetr family3e-0754.7
NC_007005:830467:845008845008845643636Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, TetR4e-0754.3
NC_015723:384000:389388389388389915528Cupriavidus necator N-1 chromosome 2, complete sequenceTetR family transcriptional regulator9e-0753.1
NC_013929:4807910:481708548170854817657573Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator9e-0753.1
NC_016582:9459566:947325194732519473763513Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator, TetR family protein1e-0652.8
NC_008314:1275617:129317512931751293768594Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator1e-0652.4
NC_004129:4993974:499953349995335000093561Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, TetR family2e-0652
NC_013595:8553904:856484385648438565427585Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family4e-0650.8