Pre_GI: BLASTP Hits

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Query: NC_009525:2635792:2636127 Mycobacterium tuberculosis H37Ra, complete genome

Start: 2636127, End: 2636423, Length: 297

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (H37Ra; ATCC 25177) is an avirulent strain derived from its virulent parent strain H37 (isolated from a 19 year-old male patient with chronic pulmonary tuberculosis by Edward R. Baldwin in 1905). Causative agent of tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:1769332:178995917899591790255297Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeesat-6 like protein EsxP7e-52202
NC_012943:1769445:179007217900721790368297Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeesat-6 like protein esxP7e-52202
NC_009525:2635792:264450326445032644826324Mycobacterium tuberculosis H37Ra, complete genomeputative esat-6 like protein2e-50197
NC_016768:1769332:178020217802021780501300Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeesat-6 like protein EsxJ2e-50197
NC_012943:1769445:178031517803151780614300Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-50197
NC_010612:4501414:450951345095134509809297Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxP_45e-47186
NC_010612:4501414:450740045074004507696297Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxP_35e-47186
NC_016948:1074034:107689310768931077174282Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein8e-43172
NC_017904:4742775:475301747530174753313297Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein9e-41165
NC_010612:4400260:440026044002604400547288Mycobacterium marinum M, complete genomeEsaT-6 like protein EsxK3e-40163
NC_017904:3113000:312967231296723129968297Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein2e-39160
NC_002677:1380000:138063913806391380941303Mycobacterium leprae TN, complete genomehypothetical protein5e-26116
NC_011896:1380000:138067913806791380981303Mycobacterium leprae Br4923, complete genomehypothetical protein5e-26116