Pre_GI: BLASTP Hits

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Query: NC_009381:1064227:1068629 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1068629, End: 1068892, Length: 264

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1765399:178311417831141783377264Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-44177
NC_017168:3290380:329416032941603294423264Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-44177
NC_009708:2245586:225066222506622250925264Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-44177
NC_010465:2282874:228795022879502288213264Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-44177
NC_008149:1842500:187660118766011876864264Yersinia pestis Nepal516, complete genomehypothetical protein2e-44177
NC_008150:1705152:173994017399401740203264Yersinia pestis Antiqua, complete genomehypothetical protein2e-44177