Pre_GI: BLASTP Hits

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Query: NC_009092:1263964:1273540 Shewanella loihica PV-4, complete genome

Start: 1273540, End: 1273974, Length: 435

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:3512471:352642835264283526880453Shewanella sp. MR-4, complete genometype IV pilus assembly protein PilX2e-49193
NC_016901:1367443:137652913765291376990462Shewanella baltica OS678 chromosome, complete genomehypothetical protein4e-40163
NC_009997:1368471:137593213759321376393462Shewanella baltica OS195, complete genometype IV pilus assembly protein PilX4e-40163
NC_009052:1211989:122107512210751221536462Shewanella baltica OS155, complete genometype IV pilus assembly protein PilX9e-40161
NC_011663:3818886:383176038317603832221462Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-39161
NC_009665:1332751:134020913402091340670462Shewanella baltica OS185 chromosome, complete genometype IV pilus assembly protein PilX6e-39159
NC_004347:3670145:368168336816833682144462Shewanella oneidensis MR-1, complete genomehypothetical protein1e-38158
NC_008577:3738758:375654337565433757004462Shewanella sp. ANA-3 chromosome 1, complete sequencetype IV pilus assembly protein PilX3e-38156
NC_008322:3585601:359730335973033597773471Shewanella sp. MR-7, complete genometype IV pilus assembly protein PilX2e-33140
NC_008700:1115436:112285511228551123325471Shewanella amazonensis SB2B, complete genometype IV pilus assembly protein PilX3e-32136
NC_009901:1309724:131731413173141317751438Shewanella pealeana ATCC 700345, complete genometype IV pilus assembly protein PilX1e-31134