Pre_GI: BLASTP Hits

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Query: NC_008593:2020473:2036993 Clostridium novyi NT, complete genome

Start: 2036993, End: 2037544, Length: 552

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2277570:228958522895852290127543Clostridium botulinum BKT015925 chromosome, complete genomeAppr-1-p processing enzyme family protein5e-72270
NC_015318:981989:998784998784999329546Hippea maritima DSM 10411 chromosome, complete genomeAppr-1-p processing domain-containing protein1e-37155
NC_011296:801612:820151820151820678528Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein5e-37153
NC_015499:309394:329865329865330440576Thermodesulfobium narugense DSM 14796 chromosome, complete genomeAppr-1-p processing domain protein4e-26117
NC_017276:362417:371594371594372127534Sulfolobus islandicus REY15A chromosome, complete genomeAppr-1-p processing protein8e-25113
NC_012785:205502:223726223726224289564Kosmotoga olearia TBF 19.5.1, complete genomeAppr-1-p processing domain protein2e-24112
NC_014537:1146000:116047611604761161033558Vulcanisaeta distributa DSM 14429 chromosome, complete genomeAppr-1-p processing domain-containing protein4e-24110
NC_013943:1381000:140081614008161401349534Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeAppr-1-p processing protein3e-23108
NC_014562:1402863:140824114082411408756516Pantoea vagans C9-1 chromosome, complete genomeUPF0189 protein2e-1995.1
NC_013716:1178383:120318112031811203744564Citrobacter rodentium ICC168, complete genomeputative DNA and/or RNA unwinding protein5e-1994
NC_015577:3589884:361920436192043619743540Treponema azotonutricium ZAS-9 chromosome, complete genomeappr-1-p processing3e-1891.7
NC_015663:3466471:350341135034113503935525Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNase III inhibitor4e-1890.9
NC_014002:1129349:113337311333731133894522Methanohalophilus mahii DSM 5219 chromosome, complete genomeAppr-1-p processing domain protein4e-1787.4
NC_015737:1976000:199722419972241997781558Clostridium sp. SY8519, complete genomehypothetical protein5e-1787
NC_015760:2009425:201393620139362014718783Streptococcus salivarius CCHSS3, complete genomeputative phosphatase6e-1787
NC_008942:960306:965356965356965907552Methanocorpusculum labreanum Z, complete genometryptophan--tRNA ligase6e-1787
NC_009831:1539159:155916715591671560048882Shewanella sediminis HAW-EB3, complete genomehypothetical protein1e-1685.9
NC_006449:1606948:160933216093321610114783Streptococcus thermophilus CNRZ1066, complete genomehypothetical protein2e-1685.5
NC_006448:1604627:160701116070111607793783Streptococcus thermophilus LMG 18311, complete genomehypothetical protein2e-1685.5
NC_016514:1701273:171098017109801711522543Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YmdB2e-1685.1
NC_004337:1065609:108312510831251083658534Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-1684.7
NC_000913:1087062:110504311050431105576534Escherichia coli K12, complete genomehypothetical protein3e-1684.3
NC_014833:2988814:2994142299414229951881047Ruminococcus albus 7 chromosome, complete genomeAppr-1-p processing domain-containing protein5e-1684
NC_014121:2629075:263871226387122639254543Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein6e-1683.6
NC_016863:1165232:119046611904661191005540Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein7e-1683.6
NC_021184:3497000:3522022352202235230351014Desulfotomaculum gibsoniae DSM 7213, complete genomeputative phosphatase, C-terminal domain of histone macro H2A1 like protein8e-1683.2
NC_015385:351393:359035359035359853819Treponema succinifaciens DSM 2489 chromosome, complete genomeAppr-1-p processing domain protein2e-1582
NC_015565:1075693:108144610814461081973528Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeAppr-1-p processing domain-containing protein5e-1580.9
NC_014221:591785:592460592460592969510Truepera radiovictrix DSM 17093 chromosome, complete genomeAppr-1-p processing domain protein7e-1580.1
NC_015968:1709680:172116717211671721709543Enterobacter asburiae LF7a chromosome, complete genomeAppr-1-p processing domain-containing protein3e-1478.2
NC_013510:747042:770255770255770767513Thermomonospora curvata DSM 43183, complete genomeAppr-1-p processing domain protein2e-1375.1
NC_007626:2204767:226176022617602262278519Magnetospirillum magneticum AMB-1, complete genomePredicted phosphatase homologous to the C-terminal domain of histone macroH2A15e-1373.9
NC_013714:1521404:152757615275761528031456Bifidobacterium dentium Bd1, complete genomeATPase associated with chromosome architecture/replication7e-1373.6
NC_013410:1651000:1678634167863416796771044Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Appr-1-p processing protein9e-1373.2
NC_015474:72103:882728827288823552Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein3e-1271.2
NC_006138:2683545:272668427266842727214531Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-1169.7
NC_013947:4917711:492470749247074925381675Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeAppr-1-p processing domain-containing protein2e-1168.9
NC_015588:95697:986439864399176534Isoptericola variabilis 225 chromosome, complete genomeAppr-1-p processing domain protein2e-1168.6
NC_009778:2227627:223456522345652235107543Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1168.2
NC_012856:207194:207854207854208369516Ralstonia pickettii 12D chromosome 1, complete genomeAppr-1-p processing domain protein4e-1167.8
NC_012803:1753138:177393417739341774461528Micrococcus luteus NCTC 2665, complete genomepredicted phosphatase, C-terminal domain of histone macro H2A1 like protein2e-1065.5
NC_008702:2892605:291588829158882916406519Azoarcus sp. BH72, complete genomeconserved hypothetical protein7e-1063.5
NC_015737:1976000:200314120031412003947807Clostridium sp. SY8519, complete genomehypothetical protein1e-0962.8
NC_004307:579729:587333587333587842510Bifidobacterium longum NCC2705, complete genomehypothetical protein2e-0962.4
NC_005230:32647:4943149431511971767Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein2e-0962
NC_015161:523278:523278523278523805528Deinococcus proteolyticus MRP chromosome, complete genomeAppr-1-p processing domain-containing protein2e-0962
NC_017218:1042298:104553410455341046043510Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomemacro domain protein3e-0961.2
NC_012791:4794362:483614348361434836664522Variovorax paradoxus S110 chromosome 1, complete genomeAppr-1-p processing domain protein2e-0755.8
NC_014761:1981435:199749119974911997970480Oceanithermus profundus DSM 14977 chromosome, complete genomeappr-1-p processing domain protein2e-0755.5
NC_009338:3359500:3368271336827133700041734Mycobacterium gilvum PYR-GCK chromosome, complete genomeappr-1-p processing domain-containing protein1e-0653.1