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Query: NC_008258:1076922:1096355 Shigella flexneri 5 str. 8401, complete genome

Start: 1096355, End: 1096744, Length: 390

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Shigella spp. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:1065609:107831310783131078702390Shigella flexneri 2a str. 301, complete genomeCurli production assembly/transport component CsgE precursor2e-71267
AC_000091:1083798:110239311023931102782390Escherichia coli W3110 DNA, complete genomepredicted transport protein1e-69261
NC_000913:1087062:110137511013751101764390Escherichia coli K12, complete genomepredicted transport protein1e-69261
NC_011083:1216500:123367712336771234072396Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,curli production assembly/transport component CsgE5e-63239
NC_003197:1207597:122932812293281229723396Salmonella typhimurium LT2, complete genomecurli production assembly/transport component5e-63239
NC_006905:1186895:120941312094131209808396Salmonella enterica subsp. enterica serovar Choleraesuis strcurli production assembly/transport component, 2nd curli operon5e-63239
NC_003198:1117687:113960311396031139998396Salmonella enterica subsp. enterica serovar Typhi str. CT18,assembly/transport component in curli production5e-63239
NC_011080:1209935:123111512311151231510396Salmonella enterica subsp. enterica serovar Newport str. SL254,curli production assembly/transport component CsgE5e-63239
NC_011094:1166271:118763511876351188030396Salmonella enterica subsp. enterica serovar Schwarzengrund strcurli assembly protein CsgE5e-63239
NC_011147:1763681:176433617643361764731396Salmonella enterica subsp. enterica serovar Paratyphi A strcurli assembly protein CsgE5e-63239
NC_017046:1164176:118554111855411185936396Salmonella enterica subsp. enterica serovar Typhimurium str. 798assembly/transport component in curli production5e-63239
NC_016863:1165232:118678111867811187176396Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1curli assembly protein CsgE5e-63239
NC_016860:1205282:122701412270141227409396Salmonella enterica subsp. enterica serovar Typhimurium strcurli assembly protein CsgE5e-63239
NC_016832:1838220:183822018382201838615396Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Curli production assembly/transport component csgE5e-63239
NC_016831:947281:992360992360992755396Salmonella enterica subsp. enterica serovar Gallinarum/pullorumassembly/transport component in curli production5e-63239
NC_013716:1178383:119953911995391199928390Citrobacter rodentium ICC168, complete genomecurli production assembly/transport component2e-61233
NC_015968:1709680:171743217174321717821390Enterobacter asburiae LF7a chromosome, complete genomeCurli assembly protein CsgE8e-50195
NC_014121:2629075:264258826425882642977390Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecurli assembly protein CsgE1e-47188
NC_018868:1960542:201294120129412013357417Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomecurli assembly protein CsgE3e-1167.4