Pre_GI: BLASTP Hits

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Query: NC_008146:4019711:4020979 Mycobacterium sp. MCS, complete genome

Start: 4020979, End: 4022151, Length: 1173

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:4053070:4055461405546140566331173Mycobacterium sp. KMS, complete genomeamidohydrolase 20781
NC_009511:1781914:1797728179772817988971170Sphingomonas wittichii RW1 chromosome, complete genomeamidohydrolase 28e-79294
NC_008278:296526:3172343172343184091176Frankia alni ACN14a, complete genomeputative aminocarboxymuconate-semialdehyde decarboxylase.4e-21102
NC_008278:2863355:2879472287947228805421071Frankia alni ACN14a, complete genomehypothetical protein8e-1995.1
NC_015576:4070195:4081356408135640825431188Mycobacterium sp. JDM601 chromosome, complete genomeamidohydrolase2e-1893.6
NC_017506:1:5687556875581821308Marinobacter adhaerens HP15 chromosome, complete genomeamidohydrolase 22e-1893.6
NC_008595:1911491:1911491191149119126211131Mycobacterium avium 104, complete genomeamidohydrolase 23e-1893.2
NC_009921:8648994:8668598866859886698871290Frankia sp. EAN1pec, complete genomeamidohydrolase 22e-1790.9
NC_009921:5508000:5521926552192655231251200Frankia sp. EAN1pec, complete genomeamidohydrolase 22e-1790.5
NC_016948:2129335:2154156215415621553641209Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein4e-1789.4
NC_016948:3724390:3742353374235337435671215Mycobacterium intracellulare MOTT-64 chromosome, complete genomeamidohydrolase2e-1687
NC_018581:3202281:3212268321226832134281161Gordonia sp. KTR9 chromosome, complete genomeputative metal-dependent hydrolase4e-1686.3
NC_014666:3311893:3327350332735033286121263Frankia sp. EuI1c chromosome, complete genomeamidohydrolase 21e-1584.3
NC_016948:1796989:1817962181796218192421281Mycobacterium intracellulare MOTT-64 chromosome, complete genomeamidohydrolase 21e-1584.3
NC_014666:1969602:1991523199152319927821260Frankia sp. EuI1c chromosome, complete genomeamidohydrolase 23e-1583.2
NC_008595:2661019:266737526673752668328954Mycobacterium avium 104, complete genomeamidohydrolase 27e-1582
NC_014666:4043279:4047331404733140486171287Frankia sp. EuI1c chromosome, complete genomeamidohydrolase 29e-1581.6
NC_015957:639774:6537986537986550181221Streptomyces violaceusniger Tu 4113 chromosome, complete genomeamidohydrolase 22e-1480.5
NC_019757:1309766:1313945131394513150301086Cylindrospermum stagnale PCC 7417, complete genomeputative TIM-barrel fold metal-dependent hydrolase8e-1375.1
NC_009921:5609770:5647311564731156486121302Frankia sp. EAN1pec, complete genomeamidohydrolase 21e-1274.3
NC_009921:3419978:3428394342839434296591266Frankia sp. EAN1pec, complete genomeamidohydrolase 27e-1272
NC_002944:1781905:1781905178190517829721068Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-0963.9
NC_014666:1805806:1819337181933718206261290Frankia sp. EuI1c chromosome, complete genomeamidohydrolase 25e-0962.4
NC_008595:1844500:1848494184849418497261233Mycobacterium avium 104, complete genomeamidohydrolase family protein4e-0756.2
NC_008726:925895:9284429284429296531212Mycobacterium vanbaalenii PYR-1, complete genomeamidohydrolase 23e-0653.5