Pre_GI: BLASTP Hits

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Query: NC_007952:444616:444616 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 444616, End: 445620, Length: 1005

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:6499234:650119765011976502162966Pseudomonas fluorescens F113 chromosome, complete genomeSsuA protein8e-29127
NC_009439:4734237:473761347376134738593981Pseudomonas mendocina ymp, complete genomealiphatic sulfonate ABC transporter periplasmic ligand-binding protein9e-29127
NC_013406:1217385:126284012628401263826987Paenibacillus sp. Y412MC10 chromosome, complete genomealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein1e-27124
NC_016023:1839503:183950318395031840489987Bacillus coagulans 36D1 chromosome, complete genomealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein6e-26118
NC_008062:370902:386999386999387970972Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceABC transporter, substrate-binding protein, aliphatic sulphonates1e-24114
NC_010512:734834:750846750846751817972Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein4e-24112
NC_008544:348500:364819364819365790972Burkholderia cenocepacia HI2424 chromosome 3, complete sequencealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein3e-24112
NC_008392:542000:543030543030544001972Burkholderia cepacia AMMD chromosome 3, complete sequencealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein7e-24111
NC_007509:1383013:487648765847972Burkholderia sp. 383 chromosome 3, complete sequenceABC transporter, substrate-binding protein, aliphatic sulphonates6e-23108
NC_007509:3668:487648765847972Burkholderia sp. 383 chromosome 3, complete sequenceABC transporter, substrate-binding protein, aliphatic sulphonates6e-23108
NC_021066:2197490:219653121965312197493963Raoultella ornithinolytica B6, complete genomealiphatic sulfonate ABC transporter substrate-binding protein8e-23107
NC_009439:4734237:474664147466414747633993Pseudomonas mendocina ymp, complete genomealiphatic sulfonate ABC transporter periplasmic ligand-binding protein1e-22107
NC_009439:4734237:474938547493854750377993Pseudomonas mendocina ymp, complete genomealiphatic sulfonate ABC transporter periplasmic ligand-binding protein1e-21103
NC_009659:1129066:114738211473821148344963Janthinobacterium sp. Marseille chromosome, complete genomesulfonate ABC transporter periplasmic sulfonate-binding protein SsuA9e-21101
NC_004578:2671508:267355826735582674532975Pseudomonas syringae pv. tomato str. DC3000, complete genomeABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family2e-20100
NC_016816:1970189:197217019721701973117948Pantoea ananatis LMG 5342, complete genomealiphatic sulfonate ABC transporter substrate-binding protein2e-20100
NC_014121:2745097:274413827441382745100963Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completealkanesulfonate transporter substrate-binding subunit3e-2099.8
NC_010505:1205747:120989612098961210894999Methylobacterium radiotolerans JCM 2831, complete genomealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein7e-1995.1
NC_010581:561579:581203581203582177975Beijerinckia indica subsp. indica ATCC 9039, complete genomealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein2e-1893.6
NC_016816:1970189:1970189197018919720751887Pantoea ananatis LMG 5342, complete genomeFis family sigma-54 specific transcriptional regulator1e-1790.5
NC_013510:517878:534199534199535191993Thermomonospora curvata DSM 43183, complete genomealiphatic sulfonates family ABC transporter, periplasmic ligand-binding protein2e-1790.1
NC_010725:5217260:523224952322495233190942Methylobacterium populi BJ001, complete genomealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein6e-1685.1
NC_009485:3461051:346335634633563464297942Bradyrhizobium sp. BTAi1 chromosome, complete genomealkanesulfonate ABC transporter substrate binding protein2e-1376.6
NC_020064:3998715:403051240305124031486975Serratia marcescens FGI94, complete genomeABC transporter, substrate-binding protein, aliphatic sulfonates family2e-1273.6
NC_013406:1217385:126499712649971265896900Paenibacillus sp. Y412MC10 chromosome, complete genomealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein4e-1272.4
NC_015565:1163148:1165148116514811661881041Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein5e-1272.4
NC_021182:4186515:4198028419802841990291002Clostridium pasteurianum BC1, complete genomeABC transporter, substrate-binding protein, aliphatic sulfonates family3e-1169.7
NC_015172:951550:9572569572569583621107Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomealiphatic sulfonates family ABC transporter, periplasmic ligand-binding protein1e-1067.8
NC_013421:4714478:4752432475243247534391008Pectobacterium wasabiae WPP163, complete genomeNMT1/THI5 like domain protein2e-1067
NC_012791:4079062:409435240943524095317966Variovorax paradoxus S110 chromosome 1, complete genomealiphatic sulfonates family ABC transporter, periplsmic ligand-binding protein2e-1066.6
NC_016604:2944555:294455529445552945532978Mycobacterium rhodesiae NBB3 chromosome, complete genomeABC transporter, substrate-binding protein, aliphatic sulfonates family2e-1066.6
NC_015565:1163148:1171741117174111727751035Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein4e-1065.9
NC_007907:2830574:2837069283706928380701002Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-1065.5
NC_015275:521436:5325635325635336241062Clostridium lentocellum DSM 5427 chromosome, complete genomealiphatic sulfonates family ABC transporter, periplasmic ligand-binding protein6e-1065.1
NC_019673:9084045:9099799909979991008601062Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-0962
NC_014733:107394:1293661293661304691104Methylovorus sp. MP688 chromosome, complete genomesulfonate ABC transporter, periplasmic sulfonate-binding protein ssua2e-0860.5
NC_020064:3998715:402387240238724024816945Serratia marcescens FGI94, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component3e-0859.7
NC_017192:1841987:1870147187014718712231077Arcobacter sp. L, complete genomeABC transporter substrate binding component3e-0859.3
NC_015565:1163148:1169787116978711707941008Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein5e-0858.9
NC_012925:191501:2069002069002079311032Streptococcus suis P1/7, complete genomeextracellular solute binding protein2e-0757.4
NC_016514:891772:931952931952932914963Enterobacter cloacae EcWSU1 chromosome, complete genomeTaurine-binding periplasmic protein2e-0756.6
NC_018607:290500:3133753133753143821008Brachyspira pilosicoli B2904 chromosome, complete genomealiphatic sulfonates ABC transporter substrate-binding protein3e-0756.2
NC_007644:469181:4691814691814702241044Moorella thermoacetica ATCC 39073, complete genomeABC transporter, substrate-binding protein, aliphatic sulphonates5e-0755.8
NC_008596:1302000:1302007130200713034641458Mycobacterium smegmatis str. MC2 155, complete genomeABC transporter substrate-binding protein5e-0755.5
NC_015859:1898693:1899628189962819006531026Corynebacterium variabile DSM 44702 chromosome, complete genomeABC transport system substrate-binding protein6e-0755.1
NC_012791:4079062:410154141015414102530990Variovorax paradoxus S110 chromosome 1, complete genomeextracellular solute-binding protein family 37e-0755.1
NC_020291:4246500:4268423426842342694631041Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometaurine-binding periplasmic protein TauA9e-0754.7
NC_013894:672840:680907680907681881975Thermocrinis albus DSM 14484 chromosome, complete genomealiphatic sulfonates family ABC transporter, periplasmic ligand-binding protein1e-0654.7
NC_010581:561579:5789225789225799471026Beijerinckia indica subsp. indica ATCC 9039, complete genomeABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family, putative1e-0654.3
NC_008027:3677500:3685745368574536868121068Pseudomonas entomophila L48, complete genomeABC transporter, periplasmic sulfonate-binding protein2e-0653.5
NC_012225:345704:358022358022358945924Brachyspira hyodysenteriae WA1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system2e-0653.1
NC_014121:2247913:2249519224951922505771059Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative ABC transporter, periplasmic protein3e-0652.8
NC_015186:2197236:222039022203902221358969Acidiphilium multivorum AIU301, complete genomeputative ABC transporter substrate-binding protein4e-0652.8
NC_020126:4084114:413879641387964139623828Myxococcus stipitatus DSM 14675, complete genomeABC-type nitrate/sulfonate/bicarbonate transport protein4e-0652.8
NC_014640:4193193:4209706420970642108151110Achromobacter xylosoxidans A8 chromosome, complete genomeABC sulfate ester transporter periplasmic ligand binding protein4e-0652.4