Pre_GI: BLASTP Hits

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Query: NC_007948:3502843:3522150 Polaromonas sp. JS666, complete genome

Start: 3522150, End: 3522902, Length: 753

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009659:2849000:287099328709932871691699Janthinobacterium sp. Marseille chromosome, complete genomeGntR family transcriptional regulator3e-33142
NC_010511:6067000:610992561099256110659735Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator6e-26117
NC_008596:4043213:404902540490254049669645Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein3e-22105
NC_014258:42262:767237672377397675Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator3e-1375.5
NC_003063:2059311:206138320613832062171789Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-1168.9
NC_014334:37040:521305213052822693Lactobacillus casei str. Zhang chromosome, complete genometranscriptional regulator7e-1167.8
NC_020207:1795993:181376518137651814427663Enterococcus faecium NRRL B-2354, complete genomeregulatory protein, GntR Bacterial regulatory protein, GntR2e-1066.2
NC_011959:131800:135215135215135898684Thermomicrobium roseum DSM 5159, complete genomeGntR-family transcriptional regulator2e-0963.2
NC_009922:315870:338735338735339421687Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, GntR family3e-0962.4
NC_014166:1008266:102271110227111023400690Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeGntR family transcriptional regulator3e-0962.4
NC_003305:1:126631266313373711Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, GntR family3e-0962
NC_020210:1908000:192856519285651929263699Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator1e-0860.5
NC_014206:1745203:174693817469381747636699Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator1e-0860.5
NC_014910:3458475:348208934820893482757669Alicycliphilus denitrificans BC chromosome, complete genomegntr domain protein1e-0860.5
NC_013411:2739989:274439727443972745095699Geobacillus sp. Y412MC61, complete genometranscriptional regulator, GntR family1e-0860.5
NC_014915:1880748:188433518843351885033699Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, GntR family1e-0860.5
NC_010505:3376322:339823433982343399088855Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, GntR family1e-0860.1
NC_012108:5273289:528731952873195287996678Desulfobacterium autotrophicum HRM2, complete genomeputative transcriptional regulator2e-0859.7
NC_013939:1625491:163746116374611638132672Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator2e-0859.7
NC_009328:1867971:186797118679711868669699Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeregulatory protein2e-0859.3
NC_008314:1955793:195959419595941960286693Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator3e-0858.9
NC_007974:785216:801188801188802060873Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family3e-0858.9
NC_012108:3824977:383239938323993833073675Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (GntR family protein)4e-0858.5
NC_014650:2097900:211502621150262115742717Geobacillus sp. Y4.1MC1 chromosome, complete genomeGntR family transcriptional regulator4e-0858.5
NC_008596:3404832:342173434217343422429696Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein6e-0857.8
NC_014410:989698:989698989698990465768Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, GntR family8e-0857.8
NC_019970:929666:929666929666930433768Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional regulator8e-0857.8
UCMB5137:3660165:368860236886023689270669Bacillus atrophaeus UCMB-5137putative transcriptional regulator8e-0857.8
NC_007963:1190847:121570212157021216370669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family9e-0857.4
NC_011894:1499229:152381215238121524516705Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family9e-0857.4
NC_010002:3357752:337233533723353373021687Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family8e-0857.4
NC_018515:937994:937994937994938674681Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator1e-0756.6
NC_012587:3177583:317681031768103177586777Rhizobium sp. NGR234, complete genomeputative transcriptional regulator, GntR family1e-0756.6
NC_016894:3329562:333153633315363332213678Acetobacterium woodii DSM 1030 chromosome, complete genomeGntR family transcriptional regulator2e-0756.6
NC_015977:2565922:256592225659222566599678Roseburia hominis A2-183 chromosome, complete genomeGntR domain containing protein2e-0756.2
NC_014119:977136:993862993862994566705Burkholderia sp. CCGE1002 chromosome chromosome 3, completetranscriptional regulator, GntR family3e-0755.8
NC_013592:3263005:328412532841253284826702Dickeya dadantii Ech586, complete genometranscriptional regulator, GntR family4e-0755.5
NC_008209:695269:716807716807717463657Roseobacter denitrificans OCh 114, complete genomeputative transcriptional regulator4e-0755.5
NC_006087:28490:482774827748990714Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, GntR family3e-0755.5
NC_013446:2655955:266091026609102661545636Comamonas testosteroni CNB-2, complete genometranscriptional regulator, GntR family3e-0755.5
NC_010511:6169468:619195061919506192657708Methylobacterium sp. 4-46 chromosome, complete genome5e-0755.1
NC_014394:93344:110272110272110943672Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, GntR family7e-0754.3
NC_020272:3396800:342166934216693422334666Bacillus amyloliquefaciens IT-45, complete genomeFatty acid metabolism regulator protein7e-0754.3
NC_009142:5647737:565529756552975655986690Saccharopolyspora erythraea NRRL 2338, complete genomepossible transcriptional regulator, GntR family7e-0754.3
NC_014931:3642779:365811536581153658783669Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, GntR family8e-0754.3
NC_011894:6485500:649703764970376497684648Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family1e-0653.9
NC_016906:3286384:328959032895903290342753Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator1e-0653.9
NC_015727:1076927:109922410992241099961738Cupriavidus necator N-1 plasmid BB1p, complete sequenceGntR family transcriptional regulator1e-0653.5
NC_013520:1905554:191069019106901911397708Veillonella parvula DSM 2008, complete genometranscriptional regulator, GntR family1e-0653.5
NC_021150:2315362:231536223153622316084723Azotobacter vinelandii CA6, complete genometranscriptional regulator, GntR2e-0653.1
NC_012560:2315350:231535023153502316072723Azotobacter vinelandii DJ, complete genometranscriptional regulator, GntR2e-0653.1
NC_014639:1:256072560726266660Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein2e-0653.1
CP002207:1:256072560726266660Bacillus atrophaeus 1942, complete genomehypothetical protein2e-0653.1
NC_017191:3901914:390191439019143902573660Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator3e-0652.4
NC_015389:616430:654375654375655133759Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family3e-0652.4
NC_002754:1061851:108024710802471080885639Sulfolobus solfataricus P2, complete genomeTranscriptional regulator3e-0652.4
NC_014963:3175912:317591231759123176580669Terriglobus saanensis SP1PR4 chromosome, complete genomeGntR family transcriptional regulator3e-0652.4
NC_020911:3046916:305943830594383060121684Octadecabacter antarcticus 307, complete genomeGntR family transcriptional regulator4e-0652
NC_006582:4256915:425897342589734259593621Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family4e-0652
NC_009648:1956070:197127419712741971990717Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranscriptional regulator6e-0651.6
NC_013524:1207845:121406112140611214792732Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genometranscriptional regulator, GntR family6e-0651.6
NC_020911:18500:339013390134626726Octadecabacter antarcticus 307, complete genomeputative GntR family transcriptional regulator5e-0651.6
NC_008268:3418000:341808234180823418726645Rhodococcus sp. RHA1, complete genomepossible transcriptional regulator, GntR family5e-0651.6
NC_008027:1847040:184704018470401847699660Pseudomonas entomophila L48, complete genometranscriptional regulator (GntR-family)5e-0651.6
NC_007974:785216:805329805329806051723Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family5e-0651.6
NC_017275:927814:944351944351944989639Sulfolobus islandicus HVE10/4 chromosome, complete genomeGntR family transcriptional regulator4e-0651.6
NC_013850:2624899:262654026265402627256717Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, GntR family7e-0651.2
NC_012731:2693091:270489427048942705610717Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical transcriptional regulator7e-0651.2
NC_011283:2627050:262869126286912629407717Klebsiella pneumoniae 342 chromosome, complete genomeGntR family transcriptional regulator7e-0651.2
NC_016845:2729654:274703827470382747754717Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,GntR family transcriptional regulator6e-0651.2
NC_009664:4423829:451763545176354518357723Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, GntR family6e-0651.2
NC_007963:3553678:356654835665483567216669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family9e-0650.8
NC_013946:2854219:287009028700902870737648Meiothermus ruber DSM 1279 chromosome, complete genomeGntR family transcriptional regulator9e-0650.8
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family9e-0650.8