Pre_GI: BLASTP Hits

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Query: NC_007946:289425:303574 Escherichia coli UTI89, complete genome

Start: 303574, End: 304038, Length: 465

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:3752619:375856837585683759032465Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, XRE family2e-76284
NC_013008:5382917:538604953860495386513465Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-74276
NC_011353:5426793:542998854299885430452465Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator4e-74276
NC_002655:5382557:538634353863435386807465Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-74276
NC_002695:5352554:535634053563405356804465Escherichia coli O157:H7 str. Sakai, complete genomeputative transcription regulator4e-74276
NC_020260:440000:450272450272450733462Cronobacter sakazakii Sp291, complete genomeXRE family transcriptional regulator2e-56217
NC_010501:3987615:399792639979263998156231Pseudomonas putida W619, complete genometranscriptional regulator, XRE family3e-1994
NC_011138:105196:130591130591131442852Alteromonas macleodii 'Deep ecotype', complete genomepredicted transcriptional regulator2e-1581.3
NC_011958:976500:984434984434985423990Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein1e-1478.6
NC_010322:5349000:536649653664965366714219Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein6e-1476.6
NC_014618:1103239:112495011249501125180231Enterobacter cloacae SCF1 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1272
NC_014500:894136:905379905379905648270Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein2e-1271.6
NC_011000:3362382:337075833707583370985228Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein2e-1271.2
NC_014500:1862000:190350619035061903814309Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein4e-1270.5
NC_014500:894136:905690905690905920231Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein5e-1270.1
NC_003902:1680414:168821416882141688693480Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-1168.6
NC_014618:1103239:112464711246471124898252Enterobacter cloacae SCF1 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1167
NC_006350:845513:873400873400873708309Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DNA-binding protein1e-1065.5
NC_010725:4035397:407959340795934079832240Methylobacterium populi BJ001, complete genometranscriptional regulator, XRE family4e-0960.5
NC_008358:2638245:269643226964322696641210Hyphomonas neptunium ATCC 15444, complete genomeDNA-binding protein4e-0960.5
NC_013421:478586:490944490944491180237Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, XRE family7e-0959.7
NC_016641:2894899:291399229139922914339348Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator8e-0959.3
NC_010617:774914:806803806803807018216Kocuria rhizophila DC2201, complete genomeXre family DNA-binding protein8e-0959.3
NC_020134:1328302:133670913367091337281573Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative cytosolic protein1e-0858.9
NC_015572:1:100251002510264240Methylomonas methanica MC09 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0858.9
NC_002936:1395432:140162414016241401842219Dehalococcoides ethenogenes 195, complete genomeDNA-binding protein1e-0858.5
NC_014483:1146682:114946911494691149816348Paenibacillus polymyxa E681 chromosome, complete genomePutative HTH-type transcriptional regulator1e-0858.5
NC_013446:1648556:169582916958291696128300Comamonas testosteroni CNB-2, complete genometranscriptional regulator, XRE family2e-0858.2
NC_014311:1507945:151246115124611512742282Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator2e-0858.2
NC_014622:5683400:568439956843995684743345Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator3e-0857.8
NC_007777:1018824:103280610328061033051246Frankia sp. CcI3, complete genometranscriptional regulator, XRE family5e-0856.6
NC_009455:273519:308492308492308707216Dehalococcoides sp. BAV1 chromosome, complete genomeXRE family transcriptional regulator6e-0856.6
NC_013890:103807:108816108816109031216Dehalococcoides sp. GT chromosome, complete genometranscriptional regulator, XRE family6e-0856.6
NC_007508:2941889:295324729532472953522276Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein7e-0856.2
NC_018867:10238:195531955319765213Dehalobacter sp. CF chromosome, complete genomeRegulatory protein C.BcnI8e-0856.2
NC_016791:3953972:395870839587083958935228Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator1e-0755.8
NC_014306:3524980:355922535592253559434210Erwinia billingiae Eb661, complete genometranscriptional regulator, XRE family1e-0755.5
NC_012808:4137000:413802541380254138288264Methylobacterium extorquens AM1, complete genomehypothetical protein2e-0755.1
NC_011662:2402408:240955324095532409810258Thauera sp. MZ1T, complete genometranscriptional regulator, XRE family2e-0754.7
NC_015572:4916430:492508549250854925324240Methylomonas methanica MC09 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0754.3
NC_010546:4923496:1108711087121721086Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein3e-0754.3
NC_014118:1083492:108753610875361087850315Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, XRE family4e-0753.9
NC_016002:1975000:200038420003842000629246Pseudogulbenkiania sp. NH8B, complete genomeputative transcriptional regulator5e-0753.5
NC_020409:1173796:118106611810661181392327Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, XRE family5e-0753.5
NC_012791:651480:656317656317656589273Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family4e-0753.5
NC_010125:381711:395573395573395824252Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulatory protein6e-0753.1
NC_010338:4481356:448954444895444489780237Caulobacter sp. K31, complete genometranscriptional regulator, XRE family6e-0753.1
NC_016616:2997348:300945030094503009686237Dechlorosoma suillum PS chromosome, complete genomeputative transcriptional regulator8e-0752.8
NC_015422:3184823:320448032044803204743264Alicycliphilus denitrificans K601 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0752.8
NC_012912:1053618:106326310632631063553291Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family1e-0652.4
NC_011365:1103927:110644811064481106699252Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeXRE family transcriptional regulator2e-0651.6
NC_009511:1746631:175245517524551752628174Sphingomonas wittichii RW1 chromosome, complete genomeXRE family transcriptional regulator2e-0651.6
NC_011979:646518:664994664994665314321Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family2e-0651.2
NC_007951:3631772:364709636470963647395300Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional Regulator, XRE family3e-0650.8
NC_010120:1065833:107078010707801071133354Neisseria meningitidis 053442, complete genometranscriptional regulator3e-0650.8
NC_015578:298989:321299321299321640342Treponema primitia ZAS-2 chromosome, complete genomeDNA-binding protein7e-0649.7