Pre_GI: BLASTP Hits

Some Help

Query: NC_007492:2771021:2788352 Pseudomonas fluorescens PfO-1, complete genome

Start: 2788352, End: 2789191, Length: 840

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008391:2045348:205197920519792052821843Burkholderia cepacia AMMD chromosome 2, complete sequenceThiJ/PfpI domain protein2e-97355
NC_010552:58294:926819268193523843Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein6e-97353
NC_011071:1877500:189201218920121892851840Stenotrophomonas maltophilia R551-3, complete genomeThiJ/PfpI domain protein1e-95349
NC_010943:2091199:210474421047442105583840Stenotrophomonas maltophilia K279a, complete genomeputative ThiJ/PfpI family protein3e-95348
NC_015947:1877887:189239018923901893229840Burkholderia sp. JV3 chromosome, complete genomeThiJ/PfpI domain-containing protein3e-95348
NC_010125:2813653:282770028277002828578879Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator5e-47187
NC_014217:4550544:458835745883574589157801Starkeya novella DSM 506 chromosome, complete genomeThiJ/PfpI domain protein7e-40164
NC_014100:2782000:278520327852032786000798Caulobacter segnis ATCC 21756 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-37156
NC_015312:848403:866992866992867717726Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeThiJ/PfpI domain-containing protein5e-26118
NC_015312:848403:8657128657128667311020Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-23109
NC_006361:1720031:174025417402541740949696Nocardia farcinica IFM 10152, complete genomehypothetical protein6e-23108
NC_008319:962968:976220976220976912693Synechococcus sp. CC9311, complete genomePredicted intracellular protease/amidase, ThiJ/PfpL family protein3e-22105
NC_013173:1259898:128897412889741289657684Desulfomicrobium baculatum DSM 4028, complete genomeThiJ/PfpI domain protein3e-22105
NC_021177:7815791:782297778229777823678702Streptomyces fulvissimus DSM 40593, complete genomeThiJ/PfpI domain-containing protein7e-22104
NC_006138:2630338:263522426352242635919696Desulfotalea psychrophila LSv54, complete genomesimilar to NonF protein2e-21102
NC_015376:3320818:333425833342583334935678Burkholderia gladioli BSR3 chromosome chromosome 2, completeNonF-related protein4e-2099
NC_015138:693865:699260699260699952693Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeThiJ/PfpI domain-containing protein1e-1894
NC_008541:2037793:205126020512602051961702Arthrobacter sp. FB24 chromosome 1, complete sequenceThiJ/PfpI domain protein3e-1892.4
NC_010552:1212000:122589912258991226585687Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein3e-1892.4
NC_014623:8763551:876860487686048769299696Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-1891.3
NC_010125:2884762:293446229344622935244783Gluconacetobacter diazotrophicus PAl 5, complete genomeputative intracellular protease/amidase2e-1789.7
NC_020181:1317647:133497513349751335655681Enterobacter aerogenes EA1509E, complete genomeThiJ/PfpI family protein4e-1789
NC_017904:2641270:265840626584062659095690Mycobacterium sp. MOTT36Y chromosome, complete genomethiJ/PfpI family protein4e-1788.6
NC_015161:792955:804304804304804990687Deinococcus proteolyticus MRP chromosome, complete genomeThiJ/PfpI domain-containing protein7e-1787.8
NC_020453:7826358:785114778511477851818672Agromonas oligotrophica S58 DNA, complete genomeputative intracellular protease/amidase1e-1583.6
NC_017047:2079368:208722620872262087930705Rahnella aquatilis HX2 chromosome, complete genomeThiJ/PfpI domain-containing protein6e-1581.6
NC_013421:801542:820907820907821671765Pectobacterium wasabiae WPP163, complete genomeThiJ/PfpI domain protein9e-1580.9
NC_011001:2327633:234700123470012347807807Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative exported Pfp1 family protein2e-1480.1
NC_010125:74904:976979769798380684Gluconacetobacter diazotrophicus PAl 5, complete genomeputative DJ-1/PfpI family3e-1479.3
NC_009092:3682413:368607036860703686741672Shewanella loihica PV-4, complete genomeThiJ/PfpI domain protein4e-1479
NC_014307:2735934:275274827527482753437690Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein5e-1478.6
NC_016109:954538:972342972342973052711Kitasatospora setae KM-6054, complete genomehypothetical protein6e-1478.2
NC_008595:1951887:196794619679461968632687Mycobacterium avium 104, complete genomeThiJ/PfpI family protein2e-1376.3
NC_008343:88184:9947799477100166690Granulibacter bethesdensis CGDNIH1, complete genomeThiJ/PfpI family protein2e-1376.3
NC_011001:2327633:233612423361242336807684Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative Pfp1 family protein1e-1273.6
NC_007912:4364215:4377415437741543785151101Saccharophagus degradans 2-40, complete genomeintracellular protease/amidase-like3e-1272.8
NC_004129:3965947:396900539690053969781777Pseudomonas fluorescens Pf-5, complete genomeThiJ/PfpI family protein2e-1272.8
NC_008391:2045348:205124420512442051957714Burkholderia cepacia AMMD chromosome 2, complete sequenceThiJ/PfpI domain protein4e-1272
NC_010552:58294:919469194692659714Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein1e-1170.5
NC_009512:3068495:307764730776473078396750Pseudomonas putida F1, complete genomeThiJ/PfpI domain protein1e-1170.1
NC_016026:2082500:208712720871272087843717Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDJ-1/PfpI family protein2e-1169.7
NC_013222:1659619:1683289168328916844071119Robiginitalea biformata HTCC2501, complete genomeDJ-1/PfpI family protein3e-1065.9
NC_020450:1254849:127006112700611270738678Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeintracellular protease/amidase3e-0962.4
NC_013169:2423863:242806424280642428795732Kytococcus sedentarius DSM 20547, complete genomeputative intracellular protease/amidase5e-0962
NC_020207:1872000:188022318802231880906684Enterococcus faecium NRRL B-2354, complete genomeThiJ, PfpI family protein7e-0857.8
NC_016027:2580477:258326225832622584131870Gluconacetobacter xylinus NBRC 3288, complete genomeprotease/amidase4e-0755.5