Pre_GI: BLASTP Hits

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Query: NC_006511:2540500:2548840 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2548840, End: 2549919, Length: 1080

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2536000:2544376254437625454551080Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial protein0749
NC_016832:2612809:2621016262101626220951080Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0746
NC_003198:331314:3559193559193569981080Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative fimbrail protein0746
NC_004631:2615908:2624115262411526251941080Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative fimbrail protein0746
NC_011083:338910:3545523545523556041053Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative fimbrail protein0722
NC_011094:334267:3568023568023578511050Salmonella enterica subsp. enterica serovar Schwarzengrund strfimbrial protein5e-105381
NC_006905:326517:351028351028351588561Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbrail protein5e-95348
NC_006905:326517:350498350498351043546Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbrail protein1e-43177
NC_017047:3869350:3892595389259538937191125Rahnella aquatilis HX2 chromosome, complete genomeCblD family pilus biogenesis initiator protein4e-39162
NC_015061:3801927:3825204382520438263281125Rahnella sp. Y9602 chromosome, complete genomeCblD family pilus biogenesis initiator protein4e-39162
NC_016818:3816000:3836785383678538379391155Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeCblD like pilus biogenesis initiator1e-34147
NC_016835:405482:4142074142074153431137Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,CblD like pilus biogenesis initiator9e-28124
NC_020181:1317647:1319115131911513202721158Enterobacter aerogenes EA1509E, complete genomeAlpha-fimbriae tip adhesin2e-1997.1
NC_009788:16360:3075630756318471092Escherichia coli E24377A plasmid pETEC_73, complete sequencefimbrial protein2e-1893.2