Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:334267 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
334267334713447hypothetical proteinBLASTP
338692338826135hypothetical protein
338804339250447hypothetical proteinBLASTP
339426339566141hypothetical proteinBLASTP
339769340251483phosphotriesteraseQuickGO ontologyBLASTP
341337341516180hypothetical proteinBLASTP
341784341924141hypothetical proteinBLASTP
343099343224126hypothetical proteinBLASTP
343169343663495spora coat assembly protein SafAQuickGO ontologyBLASTP
343747344484738pilus assembly chaperoneQuickGO ontologyBLASTP
3445083470182511outer-membrane fimbrial usher proteinQuickGO ontologyBLASTP
347040347510471fimbrial structural subunitQuickGO ontologyBLASTP
347917348738822polysaccharide deacetylaseQuickGO ontologyBLASTP
349221349352132TnpA proteinQuickGO ontologyBLASTP
349555350502948LysR-family transcriptional regulator SinRQuickGO ontologyBLASTP
352648353358711fimbrial proteinQuickGO ontologyBLASTP
353409353984576CS1 type fimbrial major subunitQuickGO ontologyBLASTP
3540933567802688TcfC proteinQuickGO ontologyBLASTP
3568023578511050fimbrial proteinQuickGO ontologyBLASTP