Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:326517 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
326517327023507hypothetical proteinBLASTP
3270393318204782Rhs-family proteinQuickGO ontologyBLASTP
331839332147309hypothetical proteinBLASTP
332206332463258hypothetical proteinBLASTP
333900334367468hypothetical proteinBLASTP
334610334963354putative cytoplasmic proteinQuickGO ontologyBLASTP
335030335344315putative cytoplasmic proteinQuickGO ontologyBLASTP
335477335617141hypothetical proteinBLASTP
335820336101282putative integrase core domainQuickGO ontologyBLASTP
336851337363513putative outer membrane proteinQuickGO ontologyBLASTP
337447338184738putative fimbriae assembly chaparoneQuickGO ontologyBLASTP
3382083407182511putative fimbriae usherQuickGO ontologyBLASTP
340740341210471putative fimbriae subunitQuickGO ontologyBLASTP
341618342439822putative xylanasechitin deacetylaseQuickGO ontologyBLASTP
343256344203948transcriptional regulatorQuickGO ontologyBLASTP
344236344487252hypothetical proteinBLASTP
344862345128267hypothetical proteinBLASTP
346343347053711putative fimbrial proteinQuickGO ontologyBLASTP
347104347679576putative fimbrial subunitQuickGO ontologyBLASTP
350498351043546putative fimbrail proteinQuickGO ontologyBLASTP
351028351588561putative fimbrail proteinQuickGO ontologyBLASTP