Pre_GI: BLASTP Hits

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Query: NC_006511:2540500:2540566 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2540566, End: 2541144, Length: 579

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2612809:261280926128092613387579Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phosphoheptose isomerase5e-109392
NC_016831:2667561:266854126685412669119579Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphosphoheptose isomerase5e-109392
NC_011147:2536000:253610225361022536680579Salmonella enterica subsp. enterica serovar Paratyphi A strphosphoheptose isomerase5e-109392
NC_004631:2615908:261590826159082616486579Salmonella enterica subsp. enterica serovar Typhi Ty2, completephosphoheptose isomerase5e-109392
NC_020260:3004500:302738430273843027965582Cronobacter sakazakii Sp291, complete genomephosphoheptose isomerase8e-106382
NC_008563:258725:275858275858276598741Escherichia coli APEC O1, complete genomephosphoheptose isomerase6e-106382
NC_007946:258747:275880275880276620741Escherichia coli UTI89, complete genomephosphoheptose isomerase6e-106382
NC_008253:257059:275367275367275945579Escherichia coli 536, complete genomephosphoheptose isomerase1e-105381
NC_007384:278810:293690293690294268579Shigella sonnei Ss046, complete genomephosphoheptose isomerase1e-105381
NC_002695:261235:281611281611282189579Escherichia coli O157:H7 str. Sakai, complete genomephosphoheptose isomerase1e-105381
NC_011751:256830:278258278258278836579Escherichia coli UMN026 chromosome, complete genomephosphoheptose isomerase1e-105381
NC_011742:258746:276041276041276619579Escherichia coli S88 chromosome, complete genomephosphoheptose isomerase1e-105381
NC_011745:258727:277940277940278518579Escherichia coli ED1a chromosome, complete genomephosphoheptose isomerase1e-105381
NC_016513:974402:100189110018911002475585Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completephosphoheptose isomerase1e-87322
NC_013416:668152:695133695133695717585Aggregatibacter actinomycetemcomitans D11S-1, complete genomephosphoheptose isomerase1e-87322
NC_009053:895965:920224920224920808585Actinobacillus pleuropneumoniae L20, complete genomephosphoheptose isomerase3e-84310
NC_010278:860165:883708883708884292585Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,phosphoheptose isomerase3e-84310
NC_014109:27500:512205122051804585Candidatus Riesia pediculicola USDA chromosome, complete genomephosphoheptose isomerase6e-66249
NC_019960:1658657:165865716586571659241585Prevotella dentalis DSM 3688 chromosome 1, complete sequencephosphoheptose isomerase3e-56217
NC_005861:2120633:214269021426902143334645Candidatus Protochlamydia amoebophila UWE25, complete genomeprobable phosphoheptose isomerase6e-45180
NC_021150:1258780:127448112744811275074594Azotobacter vinelandii CA6, complete genomephosphoheptose isomerase7e-40163
NC_012560:1260031:127446912744691275062594Azotobacter vinelandii DJ, complete genomephosphoheptose isomerase7e-40163
NC_015740:1017000:103774710377471038340594Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completephosphoheptose isomerase4e-39160
NC_015636:14000:340753407534629555Methanothermococcus okinawensis IH1 chromosome, complete genomephosphoheptose isomerase4e-39160
NC_007645:6013242:601876660187666019359594Hahella chejuensis KCTC 2396, complete genomephosphoheptose isomerase3e-38157
NC_012039:412837:455925455925456485561Campylobacter lari RM2100, complete genomephosphoheptose isomerase2e-36151
NC_009937:1733196:173731217373121737908597Azorhizobium caulinodans ORS 571, complete genomephosphoheptose isomerase2e-34145
NC_014117:132524:132524132524133111588Burkholderia sp. CCGE1002 chromosome chromosome 1, completephosphoheptose isomerase6e-34143
NC_015177:1476073:1488570148857014904921923Pedobacter saltans DSM 12145 chromosome, complete genomeglycosyl transferase group 16e-34143
NC_012483:848750:851395851395851994600Acidobacterium capsulatum ATCC 51196, complete genomephosphoheptose isomerase2e-33142
NC_006350:3329477:334216833421683342761594Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative sedoheptulose 7-phosphate isomerase2e-33142
NC_007434:3588081:360077236007723601365594Burkholderia pseudomallei 1710b chromosome I, complete sequencephosphoheptose isomerase1e-33142
NC_006348:2372945:238563623856362386229594Burkholderia mallei ATCC 23344 chromosome 1, complete sequencephosphoheptose isomerase1e-33142
NC_008836:1072721:108541210854121085990579Burkholderia mallei NCTC 10229 chromosome II, complete sequencephosphoheptose isomerase1e-33142
NC_008785:516500:537544537544538122579Burkholderia mallei SAVP1 chromosome II, complete sequencephosphoheptose isomerase1e-33142
NC_009076:3179662:319235331923533192931579Burkholderia pseudomallei 1106a chromosome I, complete sequencephosphoheptose isomerase1e-33142
NC_009074:3163362:317605331760533176631579Burkholderia pseudomallei 668 chromosome I, complete sequencephosphoheptose isomerase1e-33142
NC_009080:2123987:213667821366782137256579Burkholderia mallei NCTC 10247 chromosome II, complete sequencephosphoheptose isomerase1e-33142
NC_013889:325118:342723342723343322600Thioalkalivibrio sp. K90mix chromosome, complete genomephosphoheptose isomerase2e-33141
NC_010337:803748:827227827227827817591Heliobacterium modesticaldum Ice1, complete genomephosphoheptose isomerase3e-33141
NC_010505:1264758:128938812893881289975588Methylobacterium radiotolerans JCM 2831, complete genomephosphoheptose isomerase2e-32138
NC_007498:1491223:149122314912231491813591Pelobacter carbinolicus DSM 2380, complete genomephosphoheptose isomerase6e-32137
NC_017281:1403000:141483514148351415440606Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomephosphoheptose isomerase1e-31136
NC_015388:2211828:221283222128322213419588Desulfobacca acetoxidans DSM 11109 chromosome, complete genomePhosphoheptose isomerase7e-32136
NC_017047:4379989:440098544009854401575591Rahnella aquatilis HX2 chromosome, complete genomeDnaA initiator-associating protein DiaA2e-31135
NC_015061:4286000:430709943070994307689591Rahnella sp. Y9602 chromosome, complete genomesugar isomerase (SIS)2e-31135
NC_002163:1354215:135868913586891359294606Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative phosphoheptose isomerase6e-31133
NC_020304:547036:547036547036547620585Desulfocapsa sulfexigens DSM 10523, complete genomephosphoheptose isomerase8e-31133
NC_007947:797456:810270810270810833564Methylobacillus flagellatus KT, complete genomephosphoheptose isomerase2e-30132
NC_015186:2931000:294694829469482947547600Acidiphilium multivorum AIU301, complete genomephosphoheptose isomerase7e-29126
NC_018867:1161648:119274811927481193335588Dehalobacter sp. CF chromosome, complete genomePhosphoheptose isomerase 21e-28125
NC_010634:1175404:119759311975931198183591Yersinia pseudotuberculosis PB1/+, complete genomephosphoheptose isomerase3e-28124
NC_007347:767455:782795782795783376582Ralstonia eutropha JMP134 chromosome 1, complete sequencePhosphoheptose isomerase1e-27122
NC_011059:1896593:190546019054601906059600Prosthecochloris aestuarii DSM 271, complete genomephosphoheptose isomerase5e-27120
NC_014507:1403000:142279614227961423383588Methanoplanus petrolearius DSM 11571 chromosome, complete genomesugar isomerase (SIS)4e-27120
NC_012997:4026000:405665040566504057234585Teredinibacter turnerae T7901, complete genomephosphoheptose isomerase5e-25114
NC_015738:760309:7755587755587773811824Eggerthella sp. YY7918, complete genomenucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis1e-23109
NC_015578:1807428:182810018281001828732633Treponema primitia ZAS-2 chromosome, complete genomephosphoheptose isomerase1e-23109
NC_017068:638868:652282652282652923642Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phosphoheptose isomerase2e-23108
NC_008740:876115:891337891337891921585Marinobacter aquaeolei VT8, complete genomephosphoheptose isomerase2e-22105
NC_013510:5175649:519127051912705191935666Thermomonospora curvata DSM 43183, complete genomeputative sedoheptulose 7-phosphate isomerase9e-22103
NC_018515:4334240:433672143367214337374654Desulfosporosinus meridiei DSM 13257 chromosome, complete genomephosphoheptose isomerase6e-21100
NC_020304:2677372:272205527220552722657603Desulfocapsa sulfexigens DSM 10523, complete genomephosphoheptose isomerase2e-2099
NC_008816:1206070:122606812260681226682615Prochlorococcus marinus str. AS9601, complete genomeputative phosphoheptose isomerase9e-2096.3
NC_007908:1328832:134025713402571340859603Rhodoferax ferrireducens T118, complete genomesugar isomerase (SIS)4e-1994.4
NC_007651:3560652:359082535908253591403579Burkholderia thailandensis E264 chromosome I, complete sequencephosphoheptose isomerase8e-1993.2
NC_011992:392534:412744412744413337594Acidovorax ebreus TPSY, complete genomephosphoheptose isomerase1e-1892.8
NC_017273:352150:3752773752773764551179Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completesugar isomerase (SIS)3e-1891.7
NC_008390:235155:237355237355237939585Burkholderia cepacia AMMD chromosome 1, complete sequencephosphoheptose isomerase4e-1890.9
NC_009256:277020:277020277020277604585Burkholderia vietnamiensis G4 chromosome 1, complete sequenceFis family transcriptional regulator2e-1789
NC_016633:1898234:190436519043651904928564Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomephosphoheptose isomerase9e-1786.7
NC_015977:189101:206356206356206928573Roseburia hominis A2-183 chromosome, complete genomephosphoheptose isomerase8e-1786.7
NC_012225:316000:331100331100331726627Brachyspira hyodysenteriae WA1, complete genomePhosphoheptose isomerase1e-1685.9
NC_006350:3865584:388949638894963890074579Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phosphosugar isomerase3e-1684.7
NC_015381:252000:254439254439255023585Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-1582
NC_014376:3732547:374040737404073740988582Clostridium saccharolyticum WM1 chromosome, complete genomeputative phosphoheptose isomerase2e-1582
NC_008820:91967:986629866299330669Prochlorococcus marinus str. MIT 9303, complete genomeputative phosphoheptose isomerase4e-1580.9
NC_014960:1735786:1758937175893717600911155Anaerolinea thermophila UNI-1, complete genomehypothetical protein4e-1477.8
NC_009445:5357979:537772453777245378356633Bradyrhizobium sp. ORS 278 chromosome, complete genomephosphoheptose isomerase3e-1375.1
NC_010803:2067539:209634020963402096957618Chlorobium limicola DSM 245, complete genomeputative phosphoheptose isomerase4e-1374.3
NC_011000:183928:186107186107186691585Burkholderia cenocepacia J2315 chromosome 1, complete sequencephosphoheptose isomerase9e-1373.2
NC_013510:5175649:519045651904565191067612Thermomonospora curvata DSM 43183, complete genomephosphoheptose isomerase2e-1272
NC_018645:4104302:413283141328314133418588Desulfobacula toluolica Tol2, complete genomephosphoheptose isomerase1e-1169.7
NC_012881:964823:976363976363977055693Desulfovibrio salexigens DSM 2638, complete genomephosphoheptose isomerase4e-0961.2
NC_014844:2158318:217603821760382176592555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomesugar isomerase (SIS)8e-0753.5