Pre_GI: BLASTP Hits

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Query: NC_006155:3237990:3257744 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 3257744, End: 3258367, Length: 624

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:3155741:317525631752563175852597Yersinia pseudotuberculosis PB1/+, complete genomeNUDIX hydrolase4e-107387
NC_012880:3748665:376694937669493767524576Dickeya dadantii Ech703, complete genomeNUDIX hydrolase6e-67253
NC_012917:833721:855945855945856526582Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeNUDIX hydrolase9e-64243
NC_004547:913553:937554937554938135582Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative mutT/NUDIX family protein1e-63242
NC_013421:1038500:104165510416551042236582Pectobacterium wasabiae WPP163, complete genomeNUDIX hydrolase1e-63242
NC_014837:3126543:313990131399013140479579Pantoea sp. At-9b chromosome, complete genomeNUDIX hydrolase4e-60230
NC_015761:2444833:245193024519302452505576Salmonella bongori NCTC 12419, complete genomehypothetical protein5e-55214
NC_010623:188143:191830191830192417588Burkholderia phymatum STM815 chromosome 2, complete sequenceNUDIX hydrolase7e-50196
NC_006351:2759708:276157627615762762172597Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein2e-49195
NC_009078:2718741:272248427224842723071588Burkholderia pseudomallei 1106a chromosome II, complete sequencenudix hydrolase, YffH family2e-49195
NC_007435:1446916:145065914506591451246588Burkholderia pseudomallei 1710b chromosome II, complete sequenceconserved hypothetical protein TIGR000522e-49195
NC_007952:1416000:142246714224671423063597Burkholderia xenovorans LB400 chromosome 2, complete sequenceConserved hypothetical protein 524e-48191
NC_010572:1293786:129721412972141297921708Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-43174
NC_017186:5184000:519829351982935198850558Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein5e-43174
NC_014318:5183975:519825951982595198816558Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein5e-43174
NC_009832:2460027:246088324608832461479597Serratia proteamaculans 568, complete genomeNUDIX hydrolase9e-43173
NC_002696:3759551:377783537778353778422588Caulobacter crescentus CB15, complete genomehypothetical protein2e-42172
NC_008752:3684739:368473936847393685347609Acidovorax avenae subsp. citrulli AAC00-1, complete genomeNUDIX hydrolase9e-43172
NC_015138:2110149:212599021259902126571582Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completenucleoside diphosphate pyrophosphatase4e-42171
NC_015638:2588954:260159626015962602174579Lacinutrix sp. 5H-3-7-4 chromosome, complete genomenucleoside diphosphate pyrophosphatase5e-42170
NC_014100:172452:171868171868172455588Caulobacter segnis ATCC 21756 chromosome, complete genomeNUDIX hydrolase1e-41169
NC_008060:476861:505264505264505863600Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceNucleoside diphosphate pyrophosphatase2e-41168
NC_008542:1021848:104991110499111050510600Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceNucleoside diphosphate pyrophosphatase2e-41168
NC_010508:981377:100316710031671003766600Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceNUDIX hydrolase2e-41168
NC_013521:107937:124163124163124873711Sanguibacter keddieii DSM 10542, complete genomeprotein containing C-terminal region of TrgB protein3e-40164
NC_011666:2435438:243962924396292440225597Methylocella silvestris BL2, complete genomeNUDIX hydrolase5e-34144
NC_008344:2465042:248701224870122487647636Nitrosomonas eutropha C91, complete genomeNucleoside diphosphate pyrophosphatase5e-1580.9
NC_016632:1399993:140161314016131402266654Serratia symbiotica str. 'Cinara cedri' chromosome, completeADP-ribose pyrophosphatase7e-1580.5
NC_007802:1991211:1991211199121119923381128Jannaschia sp. CCS1, complete genomeNucleoside diphosphate pyrophosphatase3e-1478.6
NC_011420:1178762:119509311950931195734642Rhodospirillum centenum SW, complete genomehypothetical protein1e-1376.6
NC_010468:694943:716660716660717289630Escherichia coli ATCC 8739, complete genomeADP-ribose diphosphatase3e-1375.1
NC_013353:3787991:378799137879913788620630Escherichia coli O103:H2 str. 12009, complete genomeADP-ribose pyrophosphatase3e-1375.1
NC_012947:708064:728457728457729086630Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeADP-ribose pyrophosphatase NudF3e-1375.1
AP010958:3787991:378799137879913788620630Escherichia coli O103:H2 str. 12009 DNA, complete genomeADP-ribose pyrophosphatase3e-1375.1
NC_004578:5623783:564362756436275644244618Pseudomonas syringae pv. tomato str. DC3000, complete genomemutT/nudix family protein1e-1272.8
NC_007643:1781723:179533217953321795964633Rhodospirillum rubrum ATCC 11170, complete genomeNucleoside diphosphate pyrophosphatase6e-1270.9
NC_015931:71361:756267562676159534Pyrolobus fumarii 1A, complete genomeNUDIX hydrolase4e-1064.7
NC_014654:1548194:155400015540001554533534Halanaerobium sp. 'sapolanicus' chromosome, complete genomeNUDIX hydrolase2e-0962.8
NC_008789:7347:298992989930540642Halorhodospira halophila SL1, complete genomeNUDIX hydrolase2e-0962.4
NC_012115:1122905:114326811432681143843576Nautilia profundicola AmH, complete genomehypothetical protein2e-0962.4
NC_011146:4070000:407256040725604073081522Geobacter bemidjiensis Bem, complete genomeNUDIX hydrolase2e-0962.4
NC_019897:2004050:202928420292842029856573Thermobacillus composti KWC4 chromosome, complete genomeADP-ribose pyrophosphatase3e-0858.2
NC_014377:1227850:124090112409011241443543Thermosediminibacter oceani DSM 16646 chromosome, complete genomeNUDIX hydrolase2e-0756.2
NC_011661:1049767:106594210659421066496555Dictyoglomus turgidum DSM 6724, complete genomeNUDIX hydrolase6e-0754.3
NC_016024:1099602:110120211012021101801600Candidatus Chloracidobacterium thermophilum B chromosome chromosomeNTP pyrophosphohydrolase6e-0754.3
NC_016002:3077648:309227530922753092832558Pseudogulbenkiania sp. NH8B, complete genomeADP-ribose pyrophosphatase6e-0650.8
NC_015161:354000:358625358625359128504Deinococcus proteolyticus MRP chromosome, complete genomeNUDIX hydrolase7e-0650.8