Pre_GI: BLASTN Hits

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Query: NC_005945:3415135 Bacillus anthracis str. Sterne, complete genome

Start: 3415135, End: 3443387, Length: 28253

Host Lineage: Bacillus anthracis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain carries the anthrax toxin plasmid pXO1 but not the capsule plasmid pXO2 and is therefore avirulent but toxigenic. It is the counterpart to the Pasteur strain that carries pXO2 but not pXO1. This strain is often used for vaccine development. Under starvation conditions this group of bacteria initiate a pathway that leads to endospore formation, a process that is thoroughly studied and is a model system for prokaryotic development and differentiation. Spores are highly resistant to heat, cold, dessication, radiation, and disinfectants, and enable the organism to persist in otherwise inhospitable environments. Under more inviting conditions the spores germinate to produce vegetative cells. This organism was the first to be shown to cause disease by Dr. Louis Pasteur (the organism, isolated from sick animals, was grown in the laboratory and then used to infect healthy animals and make them sick). This organism was also the first for which an attenuated strain was developed as a vaccine. Herbivorous animals become infected with the organism when they ingest spores from the soil whereas humans become infected when they come into contact with a contaminated animal. PA/LF and PA/EF complexes are internalized by host cells where the LF (metalloprotease) and EF (calmodulin-dependent adenylate cyclase) components act. At high levels LF induces cell death and release of the bacterium while EF increases host susceptibility to infection and promotes fluid accumulation in the cells.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014551:37970473797047382235125305Bacillus amyloliquefaciens DSM 7, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020272:162779*16277918717724399Bacillus amyloliquefaciens IT-45, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007530:34145683414568344282128254Bacillus anthracis str. 'Ames Ancestor', complete genome028150BLASTN svgBLASTP svg
NC_003997:34144413414441344269428254Bacillus anthracis str. Ames, complete genome028150BLASTN svgBLASTP svg
NC_012472:35030003503000352566422665Bacillus cereus 03BB102, complete genome06673BLASTN svgBLASTP svg
NC_003909:34320733432073346104828976Bacillus cereus ATCC 10987, complete genome010760BLASTN svgBLASTP svg
NC_014335:34080813408081343272724647Bacillus cereus biovar anthracis str. CI chromosome, complete012820BLASTN svgBLASTP svg
NC_006274:34905983490598351459924002Bacillus cereus E33L, complete genome014400BLASTN svgBLASTP svg
NC_014479:12915001291500130965718158Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete9e-1073.8BLASTN svgBLASTP svg
NC_016047:14359611435961145932923369Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_005957:34880213488021351016622146Bacillus thuringiensis serovar konkukian str. 97-27, complete014940BLASTN svgBLASTP svg
NC_008600:34880003488000351431926320Bacillus thuringiensis str. Al Hakam, complete genome012770BLASTN svgBLASTP svg
NC_014328:23269302326930235084023911Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007350:111259712597Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,1e-0869.9BLASTN svgBLASTP svg