Pre_GI: BLASTP Hits

Some Help

Query: NC_004547:2810151:2826929 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2826929, End: 2827279, Length: 351

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008150:1593500:161406016140601614875816Yersinia pestis Antiqua, complete genomehypothetical protein4e-27119
NC_010634:2297000:231661023166102317425816Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-26117
NC_011415:2153243:216737321673732168098726Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-24109
NC_008258:1934479:195113619511361951486351Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-23108
NC_007384:1320287:132747313274731327823351Shigella sonnei Ss046, complete genome8e-24108
NC_016822:1304398:131031713103171310664348Shigella sonnei 53G, complete genomehypothetical protein8e-24108
NC_009654:4253431:425557942555794256442864Marinomonas sp. MWYL1, complete genomehypothetical protein3e-1167.4
NC_009348:3029963:306470130647013065576876Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein6e-0856.2
NC_005027:4180502:418446241844624185385924Rhodopirellula baltica SH 1, complete genomehypothetical protein1e-0652
NC_011831:4043802:404380240438024044656855Chloroflexus aggregans DSM 9485, complete genomeprotein of unknown function DUF722e-0651.2