Pre_GI: BLASTP Hits

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Query: NC_004349:3938:19154 Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence

Start: 19154, End: 19453, Length: 300

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013173:2884887:293123329312332931562330Desulfomicrobium baculatum DSM 4028, complete genomeplasmid maintenance system antidote protein, XRE family2e-1374.7
NC_015694:48344:614961496463315Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequenceplasmid maintenance system antidote protein, XRE family4e-1270.1
NC_008751:1736512:175481817548181755120303Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid maintenance system antidote protein, XRE family2e-1168.2
NC_011386:136223:169626169626169964339Oligotropha carboxidovorans OM5, complete genomeplasmid maintenance system antidote protein of XRE family2e-1167.8
NC_009937:3748885:375806937580693758392324Azorhizobium caulinodans ORS 571, complete genomeplasmid maintenance system antidote protein4e-1166.6
NC_009483:4434375:446194244619424462226285Geobacter uraniireducens Rf4 chromosome, complete genomeXRE family plasmid maintenance system antidote protein5e-1166.2
NC_016609:4233701:426360942636094263989381Niastella koreensis GR20-10 chromosome, complete genomeplasmid maintenance system antidote protein5e-1166.2
NC_008686:1960034:196580519658051966104300Paracoccus denitrificans PD1222 chromosome 1, complete sequenceplasmid maintenance system antidote protein, XRE family2e-1064.7
NC_011035:933269:948316948316948627312Neisseria gonorrhoeae NCCP11945 chromosome, complete genomePlasmid maintenance system antidote protein, XRE family8e-1062.4
NC_017511:852260:864713864713865024312Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomePlasmid maintenance system antidote protein, XRE family8e-1062.4
NC_017505:1013311:101984310198431020154312Neisseria meningitidis alpha710 chromosome, complete genomeHTH-type transcriptional regulator8e-1062.4
NC_013889:1159343:117651211765121176784273Thioalkalivibrio sp. K90mix chromosome, complete genomeplasmid maintenance system antidote protein, XRE family7e-1062.4
NC_009800:2651730:2653015265301526571124098Escherichia coli HS, complete genomeputative addiction module1e-0962
NC_013422:1755875:176959317695931769883291Halothiobacillus neapolitanus c2, complete genomeplasmid maintenance system antidote protein, XRE family1e-0961.6
NC_015410:3209954:321563332156333215920288Pseudomonas mendocina NK-01 chromosome, complete genomeantitoxin protein1e-0961.6
NC_014722:1467996:147187714718771472230354Burkholderia rhizoxinica HKI 454, complete genomevirulence-associated protein A2e-0961.2
NC_014562:1772842:179353317935331793910378Pantoea vagans C9-1 chromosome, complete genomeUncharacterized HTH-type transcriptional regulator ybaQ2e-0960.8
NC_016745:2028424:205189620518962052180285Oceanimonas sp. GK1 chromosome, complete genomeXRE family transcriptional regulator4e-0960.1
NC_021150:4201965:423203442320344232321288Azotobacter vinelandii CA6, complete genomeantitoxin protein4e-0960.1
NC_012560:4201969:423203842320384232325288Azotobacter vinelandii DJ, complete genomeantitoxin protein4e-0960.1
NC_008358:2808299:282618928261892826482294Hyphomonas neptunium ATCC 15444, complete genomeaddiction module antidote protein, HigA family6e-0959.7
NC_013861:728648:743379743379743672294Legionella longbeachae NSW150, complete genomeHypothetical Protein with Helix-turn-helix motif2e-0858.2
NC_019940:203718:210322210322210603282Thioflavicoccus mobilis 8321 chromosome, complete genomeHigA family addiction module antidote protein1e-0755.5
NC_014973:5099543:510360051036005103914315Geobacter sp. M18 chromosome, complete genomeXRE family plasmid maintenance system antidote protein2e-0754.7
NC_014032:825793:925578925578925895318Salinibacter ruber M8 chromosome, complete genomePlasmid maintenance system antidote protein3e-0753.9
NC_007677:771168:828581828581828898318Salinibacter ruber DSM 13855, complete genomeaddiction module antidote protein, HigA family3e-0753.9
NC_014761:2248000:224929522492952249597303Oceanithermus profundus DSM 14977 chromosome, complete genomeplasmid maintenance system antidote protein, xre family7e-0752.8
NC_019940:2098902:210830321083032108551249Thioflavicoccus mobilis 8321 chromosome, complete genomeHigA family addiction module antidote protein6e-0752.8
NC_016446:49618:947919479195108318Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein9e-0752.4
NC_012667:931390:991679991679991996318Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein9e-0752.4
NC_012583:335000:353675353675353992318Vibrio cholerae O395 chromosome chromosome II, complete sequenceantidote protein, putative9e-0752.4
NC_012580:353273:373272373272373589318Vibrio cholerae M66-2 chromosome II, complete sequenceantidote protein9e-0752.4
NC_012580:353273:356234356234356551318Vibrio cholerae M66-2 chromosome II, complete sequenceantidote protein9e-0752.4
NC_013889:1740858:175184017518401752157318Thioalkalivibrio sp. K90mix chromosome, complete genomeplasmid maintenance system antidote protein, XRE family1e-0652
NC_014319:587977:5901115901115911811071Leuconostoc gasicomitatum LMG 18811, complete genomeDNA-binding protein4e-0650.4
NC_013174:815155:828461828461828763303Jonesia denitrificans DSM 20603, complete genomeplasmid maintenance system antidote protein, XRE family5e-0649.7