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Query: NC_004129:2328491:2338296 Pseudomonas fluorescens Pf-5, complete genome

Start: 2338296, End: 2338372, Length: 77

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007492:2203220:22078402207840220791677Pseudomonas fluorescens PfO-1, complete genometRNA-Pro2e-0651.2
NC_018080:2288700:22960692296069229614577Pseudomonas aeruginosa DK2 chromosome, complete genometRNA-Pro7e-0649.3
NC_008027:2051821:20549462054946205502277Pseudomonas entomophila L48, complete genometRNA-Pro7e-0649.3
NC_009512:3618055:36308103630810363088677Pseudomonas putida F1, complete genometRNA-Pro7e-0649.3
NC_011770:2499432:25042662504266250434277Pseudomonas aeruginosa LESB58, complete genometRNA-Pro7e-0649.3
NC_009434:2577717:25841802584180258425677Pseudomonas stutzeri A1501, complete genometRNA-Pro7e-0649.3
NC_015740:2407500:24412652441265244134177Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetRNA-Pro7e-0649.3