Pre_GI: BLASTP Hits

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Query: NC_003210:2362306:2379418 Listeria monocytogenes EGD-e, complete genome

Start: 2379418, End: 2380419, Length: 1002

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain has numerous pathogenicity islands and genes as compared to the related non-pathogenic organism Listeria innocua. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010516:2305110:232360523236052324552948Clostridium botulinum B1 str. Okra, complete genomeprophage LambdaCh01, coat protein3e-59228
NC_007503:1486000:149627414962741497224951Carboxydothermus hydrogenoformans Z-2901, complete genomeprophage LambdaCh01, coat protein3e-58225
NC_012658:1810640:183391918339191834884966Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage coat protein2e-53209
NC_017297:2531750:254595625459562546921966Clostridium botulinum F str. 230613 chromosome, complete genomephage coat protein8e-53207
NC_010001:3614314:3629170362917036301771008Clostridium phytofermentans ISDg, complete genomephage coat protein6e-51201
NC_014376:1472304:149759614975961498594999Clostridium saccharolyticum WM1 chromosome, complete genomephage coat protein8e-47187
NC_010520:2101515:212190421219042122875972Clostridium botulinum A3 str. Loch Maree, complete genomeprophage LambdaCh01, coat protein3e-32139
NC_010609:880196:9002319002319013071077Lactobacillus reuteri JCM 1112, complete genomehypothetical protein2e-22107
NC_014006:850763:8638628638628648631002Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein2e-22106
NC_014551:576000:600991600991601977987Bacillus amyloliquefaciens DSM 7, complete genomeSPP1 phage coat protein p0234e-21102
NC_013517:1501276:1505603150560315066761074Sebaldella termitidis ATCC 33386, complete genomehypothetical protein4e-1892.4
NC_013198:1095591:1128000112800011290131014Lactobacillus rhamnosus GG, complete genomephage protein, minor capsid protein2e-1687
NC_017294:115500:1383031383031393611059Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeputative prophage Lp2 protein 401e-0963.9
NC_015913:117966:1389931389931400511059Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomephage coat protein2e-0963.5