Pre_GI: BLASTP Hits

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Query: NC_003198:3855157:3873448 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3873448, End: 3876247, Length: 2800

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:3919999:3920643392064339234412799Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-33144
NC_012125:3905782:3905782390578239085802799Salmonella enterica subsp. enterica serovar Paratyphi C strainNtrC family transcriptional regulators, ATPase domain protein5e-33144
NC_011080:3941909:3941909394190939447072799Salmonella enterica subsp. enterica serovar Newport str. SL254,sigma-54 dependent transcription regulator4e-33144
NC_011094:3853036:3853036385303638558342799Salmonella enterica subsp. enterica serovar Schwarzengrund strsigma-54 dependent transcription regulator4e-33144
NC_006511:3759550:3760690376069037634882799Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative NtrC family transcriptional regulators, ATPase domain4e-33144
NC_011083:3985618:3986758398675839895562799Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,sigma-54 dependent transcription regulator4e-33144
NC_011147:3755725:3756369375636937591672799Salmonella enterica subsp. enterica serovar Paratyphi A strNtrC family transcriptional regulator4e-33144
NC_016810:3993863:3993863399386339966612799Salmonella enterica subsp. enterica serovar Typhimurium strputative NtrC family transcriptional regulator4e-33144
NC_016856:3985597:3986241398624139890392799Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator4e-33144
NC_016857:3993864:3993864399386439966622799Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74sigma-54 dependent transcription regulator4e-33144
NC_016863:3933848:3933848393384839366462799Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator4e-33144
NC_017046:3991551:3992691399269139954892799Salmonella enterica subsp. enterica serovar Typhimurium str. 798NtrC-family transcriptional regulator4e-33144
NC_003197:3971905:3972549397254939753472799Salmonella typhimurium LT2, complete genomeputative transcriptional regulator4e-33144
NC_016860:3995445:3995445399544539982432799Salmonella enterica subsp. enterica serovar Typhimurium strsigma-54 dependent transcriptional regulator4e-33144
NC_011149:3895921:3897061389706138998592799Salmonella enterica subsp. enterica serovar Agona str. SL483,sigma-54 dependent transcription regulator5e-33143
NC_009792:4693152:4712664471266447154622799Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-29131
NC_015425:841754:8602118602118629792769Clostridium botulinum BKT015925 chromosome, complete genomesigma-54 factor, interaction domain-containing protein3e-0861.6