Pre_GI: BLASTP Hits

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Query: NC_003197:1611302:1626839 Salmonella typhimurium LT2, complete genome

Start: 1626839, End: 1627087, Length: 249

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1575488:158500715850071585255249Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-41167
NC_011149:1578451:158834815883481588596249Salmonella enterica subsp. enterica serovar Agona str. SL483,putative stability protein StbD1e-41167
NC_011094:1584038:159412715941271594375249Salmonella enterica subsp. enterica serovar Schwarzengrund strstability protein StbD1e-41167
NC_016810:1576636:158369215836921583940249Salmonella enterica subsp. enterica serovar Typhimurium strplasmid stability protein1e-41167
NC_016856:1621279:163681616368161637064249Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-41167
NC_016857:1576636:158369215836921583940249Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-41167
NC_016860:1614280:162452916245291624777249Salmonella enterica subsp. enterica serovar Typhimurium strputative stability protein StbD1e-41167
NC_012962:3568046:360445936044593604710252Photorhabdus asymbiotica, complete genomehypothetical protein7e-2199
NC_002506:370629:399576399576399824249Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein9e-1992
NC_009456:787322:852832852832853080249Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein9e-1992
NC_012580:353273:375268375268375516249Vibrio cholerae M66-2 chromosome II, complete sequenceantitoxin of toxin-antitoxin stability system, StbD family9e-1992
NC_012583:361241:410862410862411110249Vibrio cholerae O395 chromosome chromosome II, complete sequenceAntitoxin of toxin-antitoxin stability system, StbD family9e-1992
NC_012667:931390:986424986424986672249Vibrio cholerae MJ-1236 chromosome 2, complete genomeDNA for RVC repeated sequence9e-1992
NC_016446:49618:100115100115100363249Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeantitoxin of toxin-antitoxin stability system, StbD family9e-1992
NC_016945:370471:399395399395399643249Vibrio cholerae IEC224 chromosome II, complete sequenceantitoxin of toxin-antitoxin stability system, StbD family protein9e-1992
NC_012691:3126500:312833331283333128581249Tolumonas auensis DSM 9187, complete genomeprevent-host-death family protein8e-1889
NC_002506:370629:419979419979420251273Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein6e-1682.8
NC_009456:787322:834440834440834712273Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein6e-1682.8
NC_012583:361241:429230429230429502273Vibrio cholerae O395 chromosome chromosome II, complete sequenceAntitoxin of toxin-antitoxin stability system6e-1682.8
NC_012667:931390:965996965996966268273Vibrio cholerae MJ-1236 chromosome 2, complete genomestability protein StbD6e-1682.8
NC_016945:370471:419819419819420070252Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein6e-1682.8
NC_017269:303500:319999319999320250252Vibrio cholerae LMA3984-4 chromosome II, complete sequenceStbD replicon stabilization protein (antitoxin to StbE)6e-1682.8
NC_016446:119914:120523120523120792270Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeantitoxin of toxin-antitoxin stability system5e-1682.8
NC_017046:1574057:158357615835761583692117Salmonella enterica subsp. enterica serovar Typhimurium str. 798plasmid stability protein5e-1476.3
NC_006856:95830:112815112815113066252Salmonella enterica subsp. enterica serovar Choleraesuis strorf447e-1475.9
NC_015942:2213710:222955622295562229810255Acidithiobacillus ferrivorans SS3 chromosome, complete genomestability protein StbD8e-1475.9
NC_018645:2390032:240154024015402401791252Desulfobacula toluolica Tol2, complete genomeantitoxin of toxin-antitoxin stability system2e-1374.3
NC_020304:968936:978060978060978311252Desulfocapsa sulfexigens DSM 10523, complete genomeprevent-host-death family protein5e-1373.2
NC_016628:1:542054205608189Vibrio furnissii NCTC 11218 chromosome 2, complete sequencestability protein StbD2e-1271.6
NC_020908:4093560:410817841081784108423246Octadecabacter arcticus 238, complete genomeaddiction module antidote protein3e-0960.5
NC_014836:1052214:106568310656831065928246Desulfurispirillum indicum S5 chromosome, complete genomeprevent-host-death family protein5e-0959.7
NC_012917:833721:833995833995834246252Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein8e-0752.4