Pre_GI: BLASTP Hits

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Query: NC_002950:1981155:1984705 Porphyromonas gingivalis W83, complete genome

Start: 1984705, End: 1985739, Length: 1035

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015571:168617:1686171686171696511035Porphyromonas gingivalis TDC60, complete genometRNA 2-selenouridine synthase0701
NC_010729:2038118:2038118203811820391521035Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein0692
NC_002937:614000:6330966330966341361041Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completerhodanese-like domain protein3e-72272
NC_008751:2774000:2780450278045027814901041Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeRhodanese domain protein3e-71269
NC_015693:53196:7119971199722421044Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequencetRNA 2-selenouridine synthase6e-71268
NC_008819:679320:7013037013037023551053Prochlorococcus marinus str. NATL1A, complete genomePredicted ATPase1e-61237
NC_007335:117572:1385271385271395791053Prochlorococcus marinus str. NATL2A, complete genomerhodanese-like3e-60232
NC_014153:2282725:2288370228837022894971128Thiomonas intermedia K12 chromosome, complete genometRNA 2-selenouridine synthase9e-43174
NC_003366:2356148:2370650237065023717201071Clostridium perfringens str. 13, complete genomeprobable ATP /GTP binding protein2e-42173
NC_013517:1038000:1052379105237910534071029Sebaldella termitidis ATCC 33386, complete genometRNA 2-selenouridine synthase3e-42172
NC_008262:2242432:2257146225714622582161071Clostridium perfringens SM101, complete genomehypothetical protein2e-41169
NC_014118:2316000:2334907233490723359741068Burkholderia sp. CCGE1002 chromosome chromosome 2, completetRNA 2-selenouridine synthase1e-38160
NC_017280:435347:4538924538924548961005Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomeGTP-binding protein1e-34147
NC_008787:437786:4563324563324573361005Campylobacter jejuni subsp. jejuni 81-176, complete genometRNA 2-selenouridine synthase2e-34146
NC_015410:2505168:2525939252593925270391101Pseudomonas mendocina NK-01 chromosome, complete genometRNA 2-selenouridine synthase3e-34146
NC_014802:441000:458995458995459993999Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeGTP-binding protein2e-33143
NC_020260:2725201:2753961275396127551391179Cronobacter sakazakii Sp291, complete genometRNA 2-selenouridine synthase4e-26119
NC_015663:2807574:2807574280757428086501077Enterobacter aerogenes KCTC 2190 chromosome, complete genometRNA 2-selenouridine synthase1e-25117