Pre_GI: BLASTN Hits

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Query: NC_018080:4436646 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 4436646, End: 4464580, Length: 27935

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome015570BLASTN svgBLASTP svg
NC_010501:4379920*4379920440315523236Pseudomonas putida W619, complete genome0706BLASTN svgBLASTP svg
NC_007005:1738500*1738500176475226253Pseudomonas syringae pv. syringae B728a, complete genome0642BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome2e-121444BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-102381BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome4e-101377BLASTN svgBLASTP svg
NC_008463:47432964743296476909925804Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-57232BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome7e-35157BLASTN svgBLASTP svg
NC_011770:45421834542183456916026978Pseudomonas aeruginosa LESB58, complete genome3e-34155BLASTN svgBLASTP svg
NC_008463:43421194342119436920327085Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-32149BLASTN svgBLASTP svg
NC_013889:21682921682923559918771Thioalkalivibrio sp. K90mix chromosome, complete genome7e-32147BLASTN svgBLASTP svg
NC_014541:14146271414627144361328987Ferrimonas balearica DSM 9799 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome2e-26129BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_008786:18688186884262323936Verminephrobacter eiseniae EF01-2, complete genome4e-18101BLASTN svgBLASTP svg
NC_019902:49850049850052359925100Thioalkalivibrio nitratireducens DSM 14787, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009348:1663870*1663870168298019111Aeromonas salmonicida subsp. salmonicida A449, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_012779:16297311629731165390624176Edwardsiella ictaluri 93-146, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009648:838000*83800086209024091Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008463:31688373168837319814929313Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013851:2729000*2729000275222523226Allochromatium vinosum DSM 180 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_020211:2882093*2882093291409932007Serratia marcescens WW4, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_019940:2893535*2893535291820624672Thioflavicoccus mobilis 8321 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018868:12717421271742129953427793Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014500:89413689413693546441329Dickeya dadantii 3937 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010102:2287934*2287934231106023127Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-0971.9BLASTN svgBLASTP svg
NC_014733:18570201857020189477137752Methylovorus sp. MP688 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011149:28021992802199282596423766Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0869.9BLASTN svgBLASTP svg
NC_010804:2206000*2206000222893422935Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-0869.9BLASTN svgBLASTP svg
NC_009348:1347500*1347500136640418905Aeromonas salmonicida subsp. salmonicida A449, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003197:28702682870268289109020823Salmonella typhimurium LT2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012214:2673058*2673058270161428557Erwinia pyrifoliae Ep1/96, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015740:29661842966184299075224569Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_003197:815964*81596483952123558Salmonella typhimurium LT2, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006905:848000*84800086575317754Salmonella enterica subsp. enterica serovar Choleraesuis str8e-0763.9BLASTN svgBLASTP svg
NC_011080:819103*81910384387224770Salmonella enterica subsp. enterica serovar Newport str. SL254,8e-0763.9BLASTN svgBLASTP svg
NC_011083:862901*86290188778924889Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,8e-0763.9BLASTN svgBLASTP svg
NC_011149:779903*77990380318023278Salmonella enterica subsp. enterica serovar Agona str. SL483,8e-0763.9BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015424:2726223*2726223277096744745Aeromonas veronii B565 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014831:388007*38800741704429038Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008095:74992557499255752215922905Myxococcus xanthus DK 1622, complete genome3e-0661.9BLASTN svgBLASTP svg