Pre_GI: BLASTN Hits

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Query: NC_018080:3055358 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 3055358, End: 3073181, Length: 17824

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011662:2402408*2402408242621923812Thauera sp. MZ1T, complete genome06050BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete03521BLASTN svgBLASTP svg
NC_011667:1*11990019900Thauera sp. MZ1T plasmid pTha01, complete sequence03267BLASTN svgBLASTP svg
NC_004757:90541790541793018024764Nitrosomonas europaea ATCC 19718, complete genome03239BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence03106BLASTN svgBLASTP svg
NC_002516:24363042436304246509928796Pseudomonas aeruginosa PAO1, complete genome02944BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid02898BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,02859BLASTN svgBLASTP svg
NC_008345:41078474107847413795830112Shewanella frigidimarina NCIMB 400, complete genome02712BLASTN svgBLASTP svg
NC_008786:15538331553833157650522673Verminephrobacter eiseniae EF01-2, complete genome01939BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome01931BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome01917BLASTN svgBLASTP svg
NC_008609:1976403*1976403207096194559Pelobacter propionicus DSM 2379, complete genome01901BLASTN svgBLASTP svg
NC_008740:14149261414926144139326468Marinobacter aquaeolei VT8, complete genome01865BLASTN svgBLASTP svg
NC_007973:32408663240866326591125046Ralstonia metallidurans CH34 chromosome 1, complete sequence01800BLASTN svgBLASTP svg
NC_008344:1364142*1364142138709922958Nitrosomonas eutropha C91, complete genome01770BLASTN svgBLASTP svg
NC_008341:29038290385221923182Nitrosomonas eutropha C91 plasmid1, complete sequence01770BLASTN svgBLASTP svg
NC_003384:10903610903613209923064Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid01729BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete01705BLASTN svgBLASTP svg
NC_004349:393839382609922162Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence01469BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome01168BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete0989BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome0884BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome0805BLASTN svgBLASTP svg
NC_015388:2143329*2143329217016326835Desulfobacca acetoxidans DSM 11109 chromosome, complete genome0714BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome0680BLASTN svgBLASTP svg
NC_004556:10760631076063110003523973Xylella fastidiosa Temecula1, complete genome9e-160571BLASTN svgBLASTP svg
NC_002488:18126961812696186320850513Xylella fastidiosa 9a5c, complete genome1e-146527BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-114418BLASTN svgBLASTP svg
NC_008463:12930791293079133019337115Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-99371BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome2e-89337BLASTN svgBLASTP svg
NC_010801:42190642190645748035575Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-62248BLASTN svgBLASTP svg
NC_007274:72979729799468121703Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete2e-56228BLASTN svgBLASTP svg
NC_008463:31688373168837319814929313Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-53218BLASTN svgBLASTP svg
NC_010577:10870921087092110992222831Xylella fastidiosa M23, complete genome5e-41176BLASTN svgBLASTP svg
NC_002516:1236644*1236644126316626523Pseudomonas aeruginosa PAO1, complete genome1e-32149BLASTN svgBLASTP svg
NC_009350:698769872583118845Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete6e-22113BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome9e-1589.7BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome9e-1589.7BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_007509:13830131383013140599922987Burkholderia sp. 383 chromosome 3, complete sequence3e-0867.9BLASTN svgBLASTP svg
NC_015424:3890293*3890293391528924997Aeromonas veronii B565 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome8e-0660BLASTN svgBLASTP svg
NC_015063:12200012200014599924000Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequence8e-0660BLASTN svgBLASTP svg
NC_015063:111964019640Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequence8e-0660BLASTN svgBLASTP svg
NC_008686:13838911383891143076746877Paracoccus denitrificans PD1222 chromosome 1, complete sequence8e-0660BLASTN svgBLASTP svg