Query: NC_017066:312000 Rickettsia typhi str. TH1527 chromosome, complete genome
Start: 312000, End: 334353, Length: 22354
Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria
General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_006142:312000 | 312000 | 334501 | 22502 | Rickettsia typhi str. Wilmington, complete genome | 0 | 6958 | BLASTN svg | BLASTP svg |
NC_007940:322948 | 322948 | 341662 | 18715 | Rickettsia bellii RML369-C, complete genome | 0 | 906 | BLASTN svg | BLASTP svg |
NC_009883:1197500 | 1197500 | 1218599 | 21100 | Rickettsia bellii OSU 85-389, complete genome | 0 | 773 | BLASTN svg | BLASTP svg |
NC_005295:845000* | 845000 | 868265 | 23266 | Ehrlichia ruminantium str. Welgevonden, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_006832:825000* | 825000 | 844238 | 19239 | Ehrlichia ruminantium str. Welgevonden, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_006831:821000* | 821000 | 844246 | 23247 | Ehrlichia ruminantium str. Gardel, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_007109:808331 | 808331 | 826647 | 18317 | Rickettsia felis URRWXCal2, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_010184:4909183* | 4909183 | 4950599 | 41417 | Bacillus weihenstephanensis KBAB4, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_005957:4904000* | 4904000 | 4924277 | 20278 | Bacillus thuringiensis serovar konkukian str. 97-27, complete | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007354:534865 | 534865 | 557612 | 22748 | Ehrlichia canis str. Jake, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_014335:4848389* | 4848389 | 4873261 | 24873 | Bacillus cereus biovar anthracis str. CI chromosome, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012472:4908245* | 4908245 | 4947352 | 39108 | Bacillus cereus 03BB102, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008600:4898000* | 4898000 | 4933850 | 35851 | Bacillus thuringiensis str. Al Hakam, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_006274:4940922* | 4940922 | 4977599 | 36678 | Bacillus cereus E33L, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_003909:4854379* | 4854379 | 4902415 | 48037 | Bacillus cereus ATCC 10987, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007799:186000* | 186000 | 208337 | 22338 | Ehrlichia chaffeensis str. Arkansas, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013170:277321* | 277321 | 301493 | 24173 | Cryptobacterium curtum DSM 15641, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |