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Query: NC_017066:312000 Rickettsia typhi str. TH1527 chromosome, complete genome

Start: 312000, End: 334353, Length: 22354

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006142:31200031200033450122502Rickettsia typhi str. Wilmington, complete genome06958BLASTN svgBLASTP svg
NC_007940:32294832294834166218715Rickettsia bellii RML369-C, complete genome0906BLASTN svgBLASTP svg
NC_009883:11975001197500121859921100Rickettsia bellii OSU 85-389, complete genome0773BLASTN svgBLASTP svg
NC_005295:845000*84500086826523266Ehrlichia ruminantium str. Welgevonden, complete genome5e-23117BLASTN svgBLASTP svg
NC_006832:825000*82500084423819239Ehrlichia ruminantium str. Welgevonden, complete genome5e-23117BLASTN svgBLASTP svg
NC_006831:821000*82100084424623247Ehrlichia ruminantium str. Gardel, complete genome1e-20109BLASTN svgBLASTP svg
NC_007109:80833180833182664718317Rickettsia felis URRWXCal2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010184:4909183*4909183495059941417Bacillus weihenstephanensis KBAB4, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_005957:4904000*4904000492427720278Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-1075.8BLASTN svgBLASTP svg
NC_007354:53486553486555761222748Ehrlichia canis str. Jake, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014335:4848389*4848389487326124873Bacillus cereus biovar anthracis str. CI chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_012472:4908245*4908245494735239108Bacillus cereus 03BB102, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008600:4898000*4898000493385035851Bacillus thuringiensis str. Al Hakam, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006274:4940922*4940922497759936678Bacillus cereus E33L, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003909:4854379*4854379490241548037Bacillus cereus ATCC 10987, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007799:186000*18600020833722338Ehrlichia chaffeensis str. Arkansas, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013170:277321*27732130149324173Cryptobacterium curtum DSM 15641, complete genome7e-0763.9BLASTN svgBLASTP svg