Pre_GI: BLASTN Hits

Some Help

Query: NC_015957:1070500 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 1070500, End: 1100581, Length: 30082

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013595:60609660609662549919404Streptosporangium roseum DSM 43021, complete genome1e-36163BLASTN svgBLASTP svg
NC_003888:43143894314389433545821070Streptomyces coelicolor A3(2), complete genome5e-36161BLASTN svgBLASTP svg
NC_013521:16193941619394164259923206Sanguibacter keddieii DSM 10542, complete genome8e-32147BLASTN svgBLASTP svg
NC_012803:2195808*2195808224976153954Micrococcus luteus NCTC 2665, complete genome7e-26127BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome7e-23117BLASTN svgBLASTP svg
NC_014210:72371972371974915525437Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,7e-20107BLASTN svgBLASTP svg
NC_008278:6717485*6717485674098923505Frankia alni ACN14a, complete genome4e-18101BLASTN svgBLASTP svg
NC_007760:21269562126956215069023735Anaeromyxobacter dehalogenans 2CP-C, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013947:15700001570000159398623987Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008687:38826238826241359925338Paracoccus denitrificans PD1222 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_014165:925009250011009917600Thermobispora bispora DSM 43833 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_021177:4258102*4258102427958121480Streptomyces fulvissimus DSM 40593, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_013510:81052581052583159921075Thermomonospora curvata DSM 43183, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011894:62596496259649628391924271Methylobacterium nodulans ORS 2060, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008609:112340*11234013168719348Pelobacter propionicus DSM 2379, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013235:58496595849659587489725239Nakamurella multipartita DSM 44233, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013440:60457086045708606679721090Haliangium ochraceum DSM 14365, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003888:47504894750489477496724479Streptomyces coelicolor A3(2), complete genome9e-0763.9BLASTN svgBLASTP svg
NC_013595:41245412456169920455Streptosporangium roseum DSM 43021, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003888:86138488613848863240818561Streptomyces coelicolor A3(2), complete genome4e-0661.9BLASTN svgBLASTP svg