Pre_GI: BLASTN Hits

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Query: NC_014334:1039248 Lactobacillus casei str. Zhang chromosome, complete genome

Start: 1039248, End: 1062549, Length: 23302

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus casei str. Zhang was isolated from traditional home-made koumiss (fermented mare's milk) in Inner Mongolia, China. This strain has the potential probiotic properties such as high resistance to acidic pH and bile salt. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013199:24266862426686244660019915Lactobacillus rhamnosus Lc 705, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010999:1979989*1979989200135021362Lactobacillus casei, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014334:26960002696000271820622207Lactobacillus casei str. Zhang chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010999:1381497*1381497140718925693Lactobacillus casei, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007929:1290568*1290568131407323506Lactobacillus salivarius subsp. salivarius UCC118, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014334:36997436997439377323800Lactobacillus casei str. Zhang chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015278:33321933321935442021202Aerococcus urinae ACS-120-V-Col10a chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013198:24580802458080247900920930Lactobacillus rhamnosus GG, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013199:11500001150000117399223993Lactobacillus rhamnosus Lc 705, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013198:298000*29800032013422135Lactobacillus rhamnosus GG, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013199:2058857*2058857209031631460Lactobacillus rhamnosus Lc 705, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010999:2450974*2450974247597425001Lactobacillus casei, complete genome3e-0661.9BLASTN svgBLASTP svg