Pre_GI: BLASTN Hits

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Query: NC_013929:9038500 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 9038500, End: 9056572, Length: 18073

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome2e-40174BLASTN svgBLASTP svg
NC_003155:44415594441559446530823750Streptomyces avermitilis MA-4680, complete genome8e-37163BLASTN svgBLASTP svg
NC_008278:5855401*5855401589499139591Frankia alni ACN14a, complete genome7e-28133BLASTN svgBLASTP svg
NC_013595:73028887302888732647023583Streptosporangium roseum DSM 43021, complete genome4e-26127BLASTN svgBLASTP svg
NC_015312:1191633*1191633121600524373Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_013521:345308*34530838171936412Sanguibacter keddieii DSM 10542, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010572:84085008408500845070242203Streptomyces griseus subsp. griseus NBRC 13350, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010572:820008200014493162932Streptomyces griseus subsp. griseus NBRC 13350, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015957:51365005136500515422817729Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_015125:32840953284095330809924005Microbacterium testaceum StLB037, complete genome2e-0661.9BLASTN svgBLASTP svg