Query: NC_013929:6008072 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 6008072, End: 6033326, Length: 25255
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_018750:3141196* | 3141196 | 3160473 | 19278 | Streptomyces venezuelae ATCC 10712, complete genome | 2e-118 | 434 | BLASTN svg | BLASTP svg |
NC_009664:1195630* | 1195630 | 1226374 | 30745 | Kineococcus radiotolerans SRS30216, complete genome | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_008268:6149576* | 6149576 | 6176842 | 27267 | Rhodococcus sp. RHA1, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_013947:1363078* | 1363078 | 1381389 | 18312 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 1e-36 | 163 | BLASTN svg | BLASTP svg |
NC_015957:8816355 | 8816355 | 8834123 | 17769 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 4e-33 | 151 | BLASTN svg | BLASTP svg |
NC_015957:9801884 | 9801884 | 9824182 | 22299 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 3e-31 | 145 | BLASTN svg | BLASTP svg |
NC_013595:1851226 | 1851226 | 1872653 | 21428 | Streptosporangium roseum DSM 43021, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_013521:940495 | 940495 | 964099 | 23605 | Sanguibacter keddieii DSM 10542, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_004369:1051013* | 1051013 | 1073859 | 22847 | Corynebacterium efficiens YS-314, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_012483:3529895 | 3529895 | 3553420 | 23526 | Acidobacterium capsulatum ATCC 51196, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_007963:2644930 | 2644930 | 2680189 | 35260 | Chromohalobacter salexigens DSM 3043, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013093:3157897 | 3157897 | 3182093 | 24197 | Actinosynnema mirum DSM 43827, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_006177:1254635 | 1254635 | 1281529 | 26895 | Symbiobacterium thermophilum IAM 14863, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013947:1956923 | 1956923 | 1980762 | 23840 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009439:1297851 | 1297851 | 1334814 | 36964 | Pseudomonas mendocina ymp, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_013093:3068486 | 3068486 | 3113875 | 45390 | Actinosynnema mirum DSM 43827, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014550:889500 | 889500 | 915783 | 26284 | Arthrobacter arilaitensis Re117, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018868:2458122* | 2458122 | 2483886 | 25765 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015434:1671532 | 1671532 | 1690599 | 19068 | Verrucosispora maris AB-18-032 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014761:1321187* | 1321187 | 1344599 | 23413 | Oceanithermus profundus DSM 14977 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013716:1298932 | 1298932 | 1327143 | 28212 | Citrobacter rodentium ICC168, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013530:3365742* | 3365742 | 3389379 | 23638 | Xylanimonas cellulosilytica DSM 15894, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010407:2038499 | 2038499 | 2056747 | 18249 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011894:79282 | 79282 | 115363 | 36082 | Methylobacterium nodulans ORS 2060, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_012814:1757753* | 1757753 | 1780635 | 22883 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_012815:1757992* | 1757992 | 1780407 | 22416 | Bifidobacterium animalis subsp. lactis DSM 10140, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015976:2900891* | 2900891 | 2925145 | 24255 | Sphingobium sp. SYK-6, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015410:1202370* | 1202370 | 1228248 | 25879 | Pseudomonas mendocina NK-01 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014217:2987450 | 2987450 | 3010144 | 22695 | Starkeya novella DSM 506 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009921:6421387 | 6421387 | 6441947 | 20561 | Frankia sp. EAN1pec, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |