Pre_GI: BLASTN Hits

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Query: NC_013929:6008072 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6008072, End: 6033326, Length: 25255

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018750:3141196*3141196316047319278Streptomyces venezuelae ATCC 10712, complete genome2e-118434BLASTN svgBLASTP svg
NC_009664:1195630*1195630122637430745Kineococcus radiotolerans SRS30216, complete genome3e-49204BLASTN svgBLASTP svg
NC_008268:6149576*6149576617684227267Rhodococcus sp. RHA1, complete genome2e-38168BLASTN svgBLASTP svg
NC_013947:1363078*1363078138138918312Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-36163BLASTN svgBLASTP svg
NC_015957:88163558816355883412317769Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-33151BLASTN svgBLASTP svg
NC_015957:98018849801884982418222299Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-31145BLASTN svgBLASTP svg
NC_013595:18512261851226187265321428Streptosporangium roseum DSM 43021, complete genome3e-18101BLASTN svgBLASTP svg
NC_013521:94049594049596409923605Sanguibacter keddieii DSM 10542, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_004369:1051013*1051013107385922847Corynebacterium efficiens YS-314, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012483:35298953529895355342023526Acidobacterium capsulatum ATCC 51196, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007963:26449302644930268018935260Chromohalobacter salexigens DSM 3043, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006177:12546351254635128152926895Symbiobacterium thermophilum IAM 14863, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013093:30684863068486311387545390Actinosynnema mirum DSM 43827, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014550:88950088950091578326284Arthrobacter arilaitensis Re117, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_018868:2458122*2458122248388625765Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015434:16715321671532169059919068Verrucosispora maris AB-18-032 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014761:1321187*1321187134459923413Oceanithermus profundus DSM 14977 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013530:3365742*3365742338937923638Xylanimonas cellulosilytica DSM 15894, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010407:20384992038499205674718249Clavibacter michiganensis subsp. sepedonicus chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_011894:792827928211536336082Methylobacterium nodulans ORS 2060, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012814:1757753*1757753178063522883Bifidobacterium animalis subsp. lactis Bl-04, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012815:1757992*1757992178040722416Bifidobacterium animalis subsp. lactis DSM 10140, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014217:29874502987450301014422695Starkeya novella DSM 506 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009921:64213876421387644194720561Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg