Query: NC_013929:2696648 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 2696648, End: 2715084, Length: 18437
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_003888:7561923* | 7561923 | 7647787 | 85865 | Streptomyces coelicolor A3(2), complete genome | 7e-142 | 511 | BLASTN svg | BLASTP svg |
| NC_014151:4021394 | 4021394 | 4068523 | 47130 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 4e-54 | 220 | BLASTN svg | BLASTP svg |
| NC_018750:3964784* | 3964784 | 3983961 | 19178 | Streptomyces venezuelae ATCC 10712, complete genome | 1e-51 | 212 | BLASTN svg | BLASTP svg |
| NC_003888:4251867* | 4251867 | 4306406 | 54540 | Streptomyces coelicolor A3(2), complete genome | 1e-44 | 188 | BLASTN svg | BLASTP svg |
| NC_015953:3684065* | 3684065 | 3711599 | 27535 | Streptomyces sp. SirexAA-E chromosome, complete genome | 1e-38 | 168 | BLASTN svg | BLASTP svg |
| NC_014666:8016066 | 8016066 | 8053021 | 36956 | Frankia sp. EuI1c chromosome, complete genome | 3e-33 | 151 | BLASTN svg | BLASTP svg |
| NC_014210:5752651* | 5752651 | 5779999 | 27349 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 2e-31 | 145 | BLASTN svg | BLASTP svg |
| NC_013521:4240468* | 4240468 | 4267999 | 27532 | Sanguibacter keddieii DSM 10542, complete genome | 4e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_013757:2706835 | 2706835 | 2751006 | 44172 | Geodermatophilus obscurus DSM 43160, complete genome | 7e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_007333:3626510* | 3626510 | 3653999 | 27490 | Thermobifida fusca YX, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_015312:5876957* | 5876957 | 5900279 | 23323 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_015312:3290887 | 3290887 | 3312103 | 21217 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_015312:1* | 1 | 24651 | 24651 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_014151:4106624* | 4106624 | 4133999 | 27376 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_009720:4367584 | 4367584 | 4392765 | 25182 | Xanthobacter autotrophicus Py2, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_010943:2422838 | 2422838 | 2458099 | 35262 | Stenotrophomonas maltophilia K279a, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_008340:277223 | 277223 | 301806 | 24584 | Alkalilimnicola ehrlichei MLHE-1, complete genome | 1e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_011071:2207385 | 2207385 | 2231644 | 24260 | Stenotrophomonas maltophilia R551-3, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_018750:6070260 | 6070260 | 6101099 | 30840 | Streptomyces venezuelae ATCC 10712, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008541:4679022* | 4679022 | 4709999 | 30978 | Arthrobacter sp. FB24 chromosome 1, complete sequence | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_003295:2507850* | 2507850 | 2544154 | 36305 | Ralstonia solanacearum GMI1000, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_007517:3430237* | 3430237 | 3470683 | 40447 | Geobacter metallireducens GS-15, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008570:2014151* | 2014151 | 2040149 | 25999 | Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_011894:5787990 | 5787990 | 5833599 | 45610 | Methylobacterium nodulans ORS 2060, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_014550:3839389* | 3839389 | 3870999 | 31611 | Arthrobacter arilaitensis Re117, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015957:3282183 | 3282183 | 3305811 | 23629 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_006361:4597718* | 4597718 | 4628935 | 31218 | Nocardia farcinica IFM 10152, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_007164:2446879* | 2446879 | 2473499 | 26621 | Corynebacterium jeikeium K411, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013174:373726* | 373726 | 394417 | 20692 | Jonesia denitrificans DSM 20603, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015564:4727630* | 4727630 | 4753999 | 26370 | Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_020302:85821 | 85821 | 140742 | 54922 | Corynebacterium halotolerans YIM 70093 = DSM 44683, complete | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_018531:4718904* | 4718904 | 4744499 | 25596 | Arthrobacter sp. Rue61a chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_009720:750612 | 750612 | 784223 | 33612 | Xanthobacter autotrophicus Py2, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_009074:2914053* | 2914053 | 2939258 | 25206 | Burkholderia pseudomallei 668 chromosome I, complete sequence | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_003155:365500 | 365500 | 385099 | 19600 | Streptomyces avermitilis MA-4680, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |