Pre_GI: BLASTN Hits

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Query: NC_013929:2696648 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 2696648, End: 2715084, Length: 18437

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome7e-142511BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome4e-54220BLASTN svgBLASTP svg
NC_018750:3964784*3964784398396119178Streptomyces venezuelae ATCC 10712, complete genome1e-51212BLASTN svgBLASTP svg
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome1e-44188BLASTN svgBLASTP svg
NC_015953:3684065*3684065371159927535Streptomyces sp. SirexAA-E chromosome, complete genome1e-38168BLASTN svgBLASTP svg
NC_014666:80160668016066805302136956Frankia sp. EuI1c chromosome, complete genome3e-33151BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-31145BLASTN svgBLASTP svg
NC_013521:4240468*4240468426799927532Sanguibacter keddieii DSM 10542, complete genome4e-23117BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome7e-22113BLASTN svgBLASTP svg
NC_007333:3626510*3626510365399927490Thermobifida fusca YX, complete genome1e-20109BLASTN svgBLASTP svg
NC_015312:5876957*5876957590027923323Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_015312:32908873290887331210321217Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009720:43675844367584439276525182Xanthobacter autotrophicus Py2, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_010943:24228382422838245809935262Stenotrophomonas maltophilia K279a, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_011071:22073852207385223164424260Stenotrophomonas maltophilia R551-3, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_018750:60702606070260610109930840Streptomyces venezuelae ATCC 10712, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008541:4679022*4679022470999930978Arthrobacter sp. FB24 chromosome 1, complete sequence9e-0969.9BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007517:3430237*3430237347068340447Geobacter metallireducens GS-15, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011894:57879905787990583359945610Methylobacterium nodulans ORS 2060, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014550:3839389*3839389387099931611Arthrobacter arilaitensis Re117, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_006361:4597718*4597718462893531218Nocardia farcinica IFM 10152, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007164:2446879*2446879247349926621Corynebacterium jeikeium K411, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013174:373726*37372639441720692Jonesia denitrificans DSM 20603, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015564:4727630*4727630475399926370Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020302:858218582114074254922Corynebacterium halotolerans YIM 70093 = DSM 44683, complete9e-0660BLASTN svgBLASTP svg
NC_018531:4718904*4718904474449925596Arthrobacter sp. Rue61a chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_009720:75061275061278422333612Xanthobacter autotrophicus Py2, complete genome9e-0660BLASTN svgBLASTP svg
NC_009074:2914053*2914053293925825206Burkholderia pseudomallei 668 chromosome I, complete sequence9e-0660BLASTN svgBLASTP svg
NC_003155:36550036550038509919600Streptomyces avermitilis MA-4680, complete genome9e-0660BLASTN svgBLASTP svg