Pre_GI: BLASTN Hits

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Query: NC_013929:257635 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 257635, End: 276599, Length: 18965

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:7866148*7866148789016824021Streptomyces coelicolor A3(2), complete genome2e-31145BLASTN svgBLASTP svg
NC_003155:590500*59050061070320204Streptomyces avermitilis MA-4680, complete genome3e-30141BLASTN svgBLASTP svg
NC_015588:24682072468207249482226616Isoptericola variabilis 225 chromosome, complete genome7e-22113BLASTN svgBLASTP svg
NC_003888:76596397659639770388744249Streptomyces coelicolor A3(2), complete genome7e-22113BLASTN svgBLASTP svg
NC_021177:14182131418213144186323651Streptomyces fulvissimus DSM 40593, complete genome4e-20107BLASTN svgBLASTP svg
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome7e-19103BLASTN svgBLASTP svg
NC_013595:9994000*99940001001201918020Streptosporangium roseum DSM 43021, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015957:68592596859259687895419696Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_015953:58657335865733590682141089Streptomyces sp. SirexAA-E chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009142:54257635425763544844722685Saccharopolyspora erythraea NRRL 2338, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_003888:47504894750489477496724479Streptomyces coelicolor A3(2), complete genome6e-1383.8BLASTN svgBLASTP svg
NC_018524:17459491745949178032034372Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_015434:4640769*4640769466756226794Verrucosispora maris AB-18-032 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_018524:557666*55766659660438939Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013510:5394432*5394432543843244001Thermomonospora curvata DSM 43183, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013947:65858476585847662674840902Stackebrandtia nassauensis DSM 44728 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010407:151599*15159917558923991Clavibacter michiganensis subsp. sepedonicus chromosome, complete6e-0763.9BLASTN svgBLASTP svg
NC_010407:31744703174470319754523076Clavibacter michiganensis subsp. sepedonicus chromosome, complete9e-0660BLASTN svgBLASTP svg