Query: NC_011083:967260 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,
Start: 967260, End: 989099, Length: 21840
Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_011080:924326 | 924326 | 946963 | 22638 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 0 | 41790 | BLASTN svg | BLASTP svg |
NC_003197:920000 | 920000 | 944394 | 24395 | Salmonella typhimurium LT2, complete genome | 0 | 41720 | BLASTN svg | BLASTP svg |
NC_010102:2178594 | 2178594 | 2203462 | 24869 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 0 | 25060 | BLASTN svg | BLASTP svg |
NC_006905:946418 | 946418 | 972141 | 25724 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 0 | 23300 | BLASTN svg | BLASTP svg |
NC_010067:2488141 | 2488141 | 2519373 | 31233 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 0 | 3830 | BLASTN svg | BLASTP svg |
NC_012917:1923059* | 1923059 | 1947695 | 24637 | Pectobacterium carotovorum subsp. carotovorum PC1, complete genome | 2e-121 | 444 | BLASTN svg | BLASTP svg |
NC_013508:2356865* | 2356865 | 2388599 | 31735 | Edwardsiella tarda EIB202, complete genome | 2e-96 | 361 | BLASTN svg | BLASTP svg |
NC_012917:1740542 | 1740542 | 1766929 | 26388 | Pectobacterium carotovorum subsp. carotovorum PC1, complete genome | 4e-48 | 200 | BLASTN svg | BLASTP svg |
NC_015424:3112637* | 3112637 | 3180033 | 67397 | Aeromonas veronii B565 chromosome, complete genome | 7e-44 | 186 | BLASTN svg | BLASTP svg |
NC_009832:1664238 | 1664238 | 1696232 | 31995 | Serratia proteamaculans 568, complete genome | 1e-42 | 182 | BLASTN svg | BLASTP svg |
NC_020211:1655826* | 1655826 | 1678705 | 22880 | Serratia marcescens WW4, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_020064:1611820* | 1611820 | 1635185 | 23366 | Serratia marcescens FGI94, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_015572:1974000* | 1974000 | 1996165 | 22166 | Methylomonas methanica MC09 chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_014958:843456* | 843456 | 869437 | 25982 | Deinococcus maricopensis DSM 21211 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_008702:1094663* | 1094663 | 1118488 | 23826 | Azoarcus sp. BH72, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_004347:4211241* | 4211241 | 4236439 | 25199 | Shewanella oneidensis MR-1, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015061:2770856 | 2770856 | 2795599 | 24744 | Rahnella sp. Y9602 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012779:2424967* | 2424967 | 2449599 | 24633 | Edwardsiella ictaluri 93-146, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009052:4437649* | 4437649 | 4461344 | 23696 | Shewanella baltica OS155, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020064:79422* | 79422 | 125241 | 45820 | Serratia marcescens FGI94, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |