Query: NC_010610:1385066 Lactobacillus fermentum IFO 3956, complete genome
Start: 1385066, End: 1415731, Length: 30666
Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010610:755000* | 755000 | 785599 | 30600 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2787 | BLASTN svg | BLASTP svg |
| NC_010610:1649500 | 1649500 | 1672659 | 23160 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2640 | BLASTN svg | BLASTP svg |
| NC_010610:2013659 | 2013659 | 2051777 | 38119 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2593 | BLASTN svg | BLASTP svg |
| NC_010610:795975 | 795975 | 828854 | 32880 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2585 | BLASTN svg | BLASTP svg |
| NC_010610:107500 | 107500 | 134852 | 27353 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2583 | BLASTN svg | BLASTP svg |
| NC_010610:1580483* | 1580483 | 1629244 | 48762 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2541 | BLASTN svg | BLASTP svg |
| NC_010610:1765000 | 1765000 | 1793448 | 28449 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2510 | BLASTN svg | BLASTP svg |
| NC_010610:861194 | 861194 | 883923 | 22730 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2504 | BLASTN svg | BLASTP svg |
| NC_010610:908452 | 908452 | 933099 | 24648 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 1675 | BLASTN svg | BLASTP svg |
| NC_010610:1178430 | 1178430 | 1228977 | 50548 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 1029 | BLASTN svg | BLASTP svg |
| NC_010610:269380* | 269380 | 295599 | 26220 | Lactobacillus fermentum IFO 3956, complete genome | 2e-91 | 345 | BLASTN svg | BLASTP svg |
| NC_009513:1184000* | 1184000 | 1201968 | 17969 | Lactobacillus reuteri F275, complete genome | 2e-66 | 262 | BLASTN svg | BLASTP svg |
| NC_014727:966779 | 966779 | 984630 | 17852 | Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome, | 1e-18 | 103 | BLASTN svg | BLASTP svg |
| NC_008529:906576* | 906576 | 977820 | 71245 | Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_008529:887008* | 887008 | 952842 | 65835 | Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_015975:923812 | 923812 | 946258 | 22447 | Lactobacillus ruminis ATCC 27782 chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_010337:1445512 | 1445512 | 1468099 | 22588 | Heliobacterium modesticaldum Ice1, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_014836:155924* | 155924 | 178237 | 22314 | Desulfurispirillum indicum S5 chromosome, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_021150:4311902* | 4311902 | 4336135 | 24234 | Azotobacter vinelandii CA6, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_012560:4311906* | 4311906 | 4336139 | 24234 | Azotobacter vinelandii DJ, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_014972:3771642 | 3771642 | 3794625 | 22984 | Desulfobulbus propionicus DSM 2032 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_015660:2685842 | 2685842 | 2709046 | 23205 | Geobacillus thermoglucosidasius C56-YS93 chromosome, complete | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_014972:1035124 | 1035124 | 1062273 | 27150 | Desulfobulbus propionicus DSM 2032 chromosome, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_008278:5053899 | 5053899 | 5086627 | 32729 | Frankia alni ACN14a, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_009454:489954 | 489954 | 511528 | 21575 | Pelotomaculum thermopropionicum SI, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_009009:1340518 | 1340518 | 1359917 | 19400 | Streptococcus sanguinis SK36, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_016027:346768 | 346768 | 365099 | 18332 | Gluconacetobacter xylinus NBRC 3288, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014500:4883794 | 4883794 | 4903284 | 19491 | Dickeya dadantii 3937 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010524:3094303* | 3094303 | 3114531 | 20229 | Leptothrix cholodnii SP-6, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008618:1456000* | 1456000 | 1481099 | 25100 | Bifidobacterium adolescentis ATCC 15703, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_004129:957890* | 957890 | 980099 | 22210 | Pseudomonas fluorescens Pf-5, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |