Query: NC_010519:796229 Haemophilus somnus 2336 chromosome, complete genome
Start: 796229, End: 822835, Length: 26607
Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria
General Information: This strain was isolated from the lung of a calf which had pneumonia. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_008309:385592 | 385592 | 409099 | 23508 | Haemophilus somnus 129PT, complete genome | 0 | 10020 | BLASTN svg | BLASTP svg |
NC_008309:190550 | 190550 | 222599 | 32050 | Haemophilus somnus 129PT, complete genome | 3e-139 | 504 | BLASTN svg | BLASTP svg |
NC_008309:1827809 | 1827809 | 1851140 | 23332 | Haemophilus somnus 129PT, complete genome | 2e-109 | 404 | BLASTN svg | BLASTP svg |
NC_008309:842072 | 842072 | 869315 | 27244 | Haemophilus somnus 129PT, complete genome | 9e-87 | 329 | BLASTN svg | BLASTP svg |
NC_008309:1851189* | 1851189 | 1879447 | 28259 | Haemophilus somnus 129PT, complete genome | 4e-70 | 274 | BLASTN svg | BLASTP svg |
NC_008309:1289370 | 1289370 | 1314906 | 25537 | Haemophilus somnus 129PT, complete genome | 4e-70 | 274 | BLASTN svg | BLASTP svg |
NC_008309:1200245* | 1200245 | 1218599 | 18355 | Haemophilus somnus 129PT, complete genome | 1e-67 | 266 | BLASTN svg | BLASTP svg |
NC_008309:1155218 | 1155218 | 1178249 | 23032 | Haemophilus somnus 129PT, complete genome | 5e-51 | 210 | BLASTN svg | BLASTP svg |
NC_010554:2646806 | 2646806 | 2726511 | 79706 | Proteus mirabilis HI4320, complete genome | 8e-44 | 186 | BLASTN svg | BLASTP svg |
NC_008309:502983* | 502983 | 529268 | 26286 | Haemophilus somnus 129PT, complete genome | 1e-27 | 133 | BLASTN svg | BLASTP svg |
NC_013716:5141269* | 5141269 | 5170088 | 28820 | Citrobacter rodentium ICC168, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_012691:241404 | 241404 | 265127 | 23724 | Tolumonas auensis DSM 9187, complete genome | 6e-26 | 127 | BLASTN svg | BLASTP svg |
NC_003143:2849377 | 2849377 | 2872099 | 22723 | Yersinia pestis CO92, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_004088:1801819 | 1801819 | 1824253 | 22435 | Yersinia pestis KIM, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_005810:2613456 | 2613456 | 2636099 | 22644 | Yersinia pestis biovar Microtus str. 91001, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_008149:2411161 | 2411161 | 2434099 | 22939 | Yersinia pestis Nepal516, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_010159:1861465 | 1861465 | 1884099 | 22635 | Yersinia pestis Angola, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_010634:2960000 | 2960000 | 2982099 | 22100 | Yersinia pseudotuberculosis PB1/+, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_010465:1724000 | 1724000 | 1746099 | 22100 | Yersinia pseudotuberculosis YPIII, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_007645:6013242* | 6013242 | 6037210 | 23969 | Hahella chejuensis KCTC 2396, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_006155:3040769 | 3040769 | 3064099 | 23331 | Yersinia pseudotuberculosis IP 32953, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_006300:600516 | 600516 | 631510 | 30995 | Mannheimia succiniciproducens MBEL55E, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012214:745302 | 745302 | 766959 | 21658 | Erwinia pyrifoliae Ep1/96, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_006370:166000 | 166000 | 188675 | 22676 | Photobacterium profundum SS9 chromosome 1, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013961:3083816 | 3083816 | 3106099 | 22284 | Erwinia amylovora, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008563:4905186 | 4905186 | 4923605 | 18420 | Escherichia coli APEC O1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
CP002185:4750571* | 4750571 | 4772512 | 21942 | Escherichia coli W, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |