Pre_GI: BLASTN Hits

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Query: NC_010513:542312 Xylella fastidiosa M12 chromosome, complete genome

Start: 542312, End: 568613, Length: 26302

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Causal agent of citrus variegated chlorosis. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. This disease was first noticed in Brazil in 1987, and it greatly affects commercial orchards resulting in crop devastation worldwide. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. The bacteria are transmitted from the gut of the insect vector (sharpshooter leafhopper) to the plant xylem (water conducting system) when the insect feeds. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010577:530917*53091756659335677Xylella fastidiosa M23, complete genome034540BLASTN svgBLASTP svg
NC_004556:531000*53100056678535786Xylella fastidiosa Temecula1, complete genome034540BLASTN svgBLASTP svg
NC_002488:1099975*1099975114540245428Xylella fastidiosa 9a5c, complete genome034410BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome4e-24121BLASTN svgBLASTP svg
NC_007005:60567656056765608605229288Pseudomonas syringae pv. syringae B728a, complete genome6e-23117BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015581:128350*12835015453826189Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_007492:6372900*6372900643584362944Pseudomonas fluorescens PfO-1, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_005966:159232*15923218289723666Acinetobacter sp. ADP1, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015696:517941*51794157358855648Francisella sp. TX077308 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015696:220798*22079825652935732Francisella sp. TX077308 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005061:214168*21416823856824401Candidatus Blochmannia floridanus, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008601:1733940*1733940179060556666Francisella tularensis subsp. novicida U112, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015662:385461*38546140759922139Buchnera aphidicola (Cinara tujafilina) chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_009465:171000*17100019666925670Candidatus Vesicomyosocius okutanii HA, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006570:24636*246367715752522Francisella tularensis subsp. tularensis Schu 4, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007880:1703346*1703346176005556710Francisella tularensis subsp. holarctica, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008245:24652*246526389439243Francisella tularensis subsp. tularensis FSC 198, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008369:1702885*1702885175731754433Francisella tularensis subsp. holarctica OSU18, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009749:1699152*1699152175595256801Francisella tularensis subsp. holarctica FTA, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010677:96470*9647014828851819Francisella tularensis subsp. mediasiatica FSC147, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013166:32474324748099448521Kangiella koreensis DSM 16069, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015222:1047944*1047944107609928156Nitrosomonas sp. AL212 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_021177:5697210*5697210572187724668Streptomyces fulvissimus DSM 40593, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015572:4209000*4209000424633837339Methylomonas methanica MC09 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012968:381771*38177140409922329Methylotenera mobilis JLW8, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006142:811469*81146983714125673Rickettsia typhi str. Wilmington, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010793:1075388*1075388110374328356Orientia tsutsugamushi str. Ikeda, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015572:49164304916430495009933670Methylomonas methanica MC09 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018720:18782011878201190278524585Bifidobacterium asteroides PRL2011 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002745:2152000*2152000217427622277Staphylococcus aureus subsp. aureus N315, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002758:2227874*2227874225013222259Staphylococcus aureus subsp. aureus Mu50, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002951:2153571*2153571217716123591Staphylococcus aureus subsp. aureus COL, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002952:2256000*2256000227809922100Staphylococcus aureus subsp. aureus MRSA252, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002953:2157781*2157781218009922319Staphylococcus aureus subsp. aureus MSSA476, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003923:2178000*2178000220034322344Staphylococcus aureus subsp. aureus MW2, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007622:2117188*2117188213617218985Staphylococcus aureus RF122, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007645:6327428*6327428635426926842Hahella chejuensis KCTC 2396, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_018515:223164*22316424765124488Desulfosporosinus meridiei DSM 13257 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014497:180000*18000020623126232Candidatus Zinderia insecticola CARI chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010079:2217767*2217767224135723591Staphylococcus aureus subsp. aureus USA300_TCH1516, complete5e-0867.9BLASTN svgBLASTP svg
NC_009782:2230000*2230000225234622347Staphylococcus aureus subsp. aureus Mu3, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007795:2163706*2163706218609922394Staphylococcus aureus subsp. aureus NCTC 8325, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007793:2217872*2217872224096323092Staphylococcus aureus subsp. aureus USA300, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004061:540354*54035456467824325Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005955:947500*94750097976232263Bartonella quintana str. Toulouse, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006677:1431500*1431500145622224723Gluconobacter oxydans 621H, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007354:771087710813002652919Ehrlichia canis str. Jake, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009879:860925*86092589071729793Rickettsia canadensis str. McKiel, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009881:896007*89600792377327767Rickettsia akari str. Hartford, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010336:996661*996661105214055480Francisella philomiragia subsp. philomiragia ATCC 25017, complete2e-0765.9BLASTN svgBLASTP svg
NC_003030:3251941*3251941329013838198Clostridium acetobutylicum ATCC 824, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006832:978837*97883799940320567Ehrlichia ruminantium str. Welgevonden, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012985:123500*12350014685123352Candidatus Liberibacter asiaticus str. psy62, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014909:219498*21949824042420927Candidatus Blochmannia vafer str. BVAF chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015061:366552*36655238559319042Rahnella sp. Y9602 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015687:3252233*3252233329176539533Clostridium acetobutylicum DSM 1731 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_018750:5399316*5399316541712617811Streptomyces venezuelae ATCC 10712, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_005861:544280*54428056409919820Candidatus Protochlamydia amoebophila UWE25, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007799:392355*39235541894126587Ehrlichia chaffeensis str. Arkansas, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007947:290864*29086430939718534Methylobacillus flagellatus KT, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008513:343540*34354036517621637Buchnera aphidicola str. Cc (Cinara cedri), complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009850:1601982*1601982162099819017Arcobacter butzleri RM4018, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012560:603447*60344762358120135Azotobacter vinelandii DJ, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013282:3962188*3962188399784335656Cronobacter turicensis, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_021150:603447*60344762358120135Azotobacter vinelandii CA6, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_000963:803435*80343583065627222Rickettsia prowazekii str. Madrid E, complete genome3e-0661.9BLASTN svgBLASTP svg