Pre_GI: BLASTN Hits

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Query: NC_010501:1868888 Pseudomonas putida W619, complete genome

Start: 1868888, End: 1905275, Length: 36388

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome01850BLASTN svgBLASTP svg
NC_015733:1943385*1943385196159918215Pseudomonas putida S16 chromosome, complete genome01374BLASTN svgBLASTP svg
NC_020209:945000*94500096809923100Pseudomonas poae RE*1-1-14, complete genome0981BLASTN svgBLASTP svg
NC_004129:22017802201780222535423575Pseudomonas fluorescens Pf-5, complete genome0932BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome1e-117432BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome2e-69272BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome9e-69270BLASTN svgBLASTP svg
NC_007492:5214709*5214709524168426976Pseudomonas fluorescens PfO-1, complete genome3e-47198BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome5e-24121BLASTN svgBLASTP svg
NC_008786:2687688*2687688271388926202Verminephrobacter eiseniae EF01-2, complete genome5e-24121BLASTN svgBLASTP svg
NC_008390:987052987052101116924118Burkholderia cepacia AMMD chromosome 1, complete sequence1e-21113BLASTN svgBLASTP svg
NC_014532:34796743479674350706927396Halomonas elongata DSM 2581, complete genome1e-18103BLASTN svgBLASTP svg
NC_010645:15238671523867154936425498Bordetella avium 197N, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_008060:1182378*1182378120591323536Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_008542:1727000*1727000174809921100Burkholderia cenocepacia HI2424 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_007645:2408125*2408125246220454080Hahella chejuensis KCTC 2396, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008686:13838911383891143076746877Paracoccus denitrificans PD1222 chromosome 1, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_015733:27201832720183276059940417Pseudomonas putida S16 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007963:1370903*1370903139119320291Chromohalobacter salexigens DSM 3043, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_010508:1705500*1705500172769222193Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_013851:2729000*2729000275222523226Allochromatium vinosum DSM 180 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_008781:654289*65428967826423976Polaromonas naphthalenivorans CJ2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010465:39587663958766397730818543Yersinia pseudotuberculosis YPIII, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007973:2150962*2150962217292621965Ralstonia metallidurans CH34 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_013959:11952491195249121309917851Sideroxydans lithotrophicus ES-1 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012917:83372183372187179538075Pectobacterium carotovorum subsp. carotovorum PC1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-0661.9BLASTN svgBLASTP svg