Query: NC_010001:3369500 Clostridium phytofermentans ISDg, complete genome
Start: 3369500, End: 3395880, Length: 26381
Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria
General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_014387:1175927* | 1175927 | 1207090 | 31164 | Butyrivibrio proteoclasticus B316 chromosome 1, complete genome | 3e-40 | 174 | BLASTN svg | BLASTP svg |
NC_014376:3214222* | 3214222 | 3236599 | 22378 | Clostridium saccharolyticum WM1 chromosome, complete genome | 1e-36 | 163 | BLASTN svg | BLASTP svg |
NC_010184:3675424* | 3675424 | 3698410 | 22987 | Bacillus weihenstephanensis KBAB4, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_003997:3617000* | 3617000 | 3674607 | 57608 | Bacillus anthracis str. Ames, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_005945:3615623* | 3615623 | 3634386 | 18764 | Bacillus anthracis str. Sterne, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_005957:3638750* | 3638750 | 3658559 | 19810 | Bacillus thuringiensis serovar konkukian str. 97-27, complete | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007530:3616828* | 3616828 | 3676378 | 59551 | Bacillus anthracis str. 'Ames Ancestor', complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008600:3643905* | 3643905 | 3663189 | 19285 | Bacillus thuringiensis str. Al Hakam, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011772:3787500* | 3787500 | 3816375 | 28876 | Bacillus cereus G9842, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012225:1657248* | 1657248 | 1683048 | 25801 | Brachyspira hyodysenteriae WA1, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012472:3661912* | 3661912 | 3681190 | 19279 | Bacillus cereus 03BB102, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014335:3567931* | 3567931 | 3586368 | 18438 | Bacillus cereus biovar anthracis str. CI chromosome, complete | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010336:996661* | 996661 | 1052140 | 55480 | Francisella philomiragia subsp. philomiragia ATCC 25017, complete | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014330:841841* | 841841 | 864342 | 22502 | Brachyspira pilosicoli 95/1000 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018607:2184832* | 2184832 | 2203486 | 18655 | Brachyspira pilosicoli B2904 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018604:2303239* | 2303239 | 2321886 | 18648 | Brachyspira pilosicoli WesB complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_011898:513835* | 513835 | 536547 | 22713 | Clostridium cellulolyticum H10, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_006274:3697255* | 3697255 | 3725930 | 28676 | Bacillus cereus E33L, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_003909:3587695* | 3587695 | 3606099 | 18405 | Bacillus cereus ATCC 10987, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_004722:3777907* | 3777907 | 3796348 | 18442 | Bacillus cereus ATCC 14579, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014758:1349494* | 1349494 | 1370048 | 20555 | Calditerrivibrio nitroreducens DSM 19672 chromosome, complete | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015275:2712991* | 2712991 | 2732297 | 19307 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015968:4117835* | 4117835 | 4167111 | 49277 | Enterobacter asburiae LF7a chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010520:2585014* | 2585014 | 2620419 | 35406 | Clostridium botulinum A3 str. Loch Maree, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |